Dipodomys ordii (Ord's kangaroo rat): 105997362
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Entry
105997362 CDS
T07834
Symbol
Clstn1
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dord04515
]
105997362 (Clstn1)
Cell adhesion molecules [BR:
dord04515
]
Cadherins
Cadherin related
105997362 (Clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
FAM176
Toxin_R_bind_N
EphA2_TM
V_ATPase_I
Cadherin_C_2
UQ_con
SID-1_RNA_chan
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
105997362
NCBI-ProteinID:
XP_012887226
Ensembl:
ENSDORG00000012409
UniProt:
A0A1S3GEI0
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MAEDVMVNLGQTCNTVNKHKPWLEPTYHGIVTENDNTVLLDPPLIALDKDAPLRFAESFE
VTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQAYDCGK
GPDGTGVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVVEGKQYGSILRVEAVDADCSPQ
FSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKI
SIKPTCTPGWQGWSNRIEYEPGTGALAVFPNIHLETCDEPVASVQATVELETSHIGKGCD
RDTYSEKSLHRLCGAAAGTAELLPSPSSSLNWTIGLPTDNGHDSDQVFEFNGTQAVRIPD
GIVSLNPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLIFLLRQDP
SEEKKYKPAEFHWKLNQVCDEEWHHFVLNVEFPSVTLYVDGVSHEPFSVTEDYPLHPTKI
ETQLVVGACWQEYSGVESDNETEPVTMASAGGDLHMTQFFRGNLAGLTVRSGKLADKKVI
DCLYTCKEGLDLQVPDDGGQGVQIQASPSQSVLTLEGDDIGELDKAMQHVSYLNSRQFPT
PGIRRLRITSTVKCFNEAACIEVPPVEGYVMVLQPEEPKISLSGIHHFARAASEFESSEG
VFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEEIVHDLDTCEVTVEGEELNPEQES
LEVDMARLQQKGIEVSRSGLGVVFTGVDTMASYEELLHLLRYRNWHTRSLLDRKFKLICS
ELNGRYLSNEFKVEVNVIHTANPMEHANHMAAQPQFVHPEHRSFVDLSGHNLANPHPFAV
VPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPM
ETYEDQHSSEEEEEEEEEEESEDGEEEEDITSAESESSEEEEGGPGDGQNATRQQQLEWD
DSTLSY
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggatgtgatggtgaatctgggacagacttgcaacacagttaacaagcacaag
ccatggctcgaaccgacctatcatggaattgttacggagaacgacaacacggtgctgctt
gatcctcccctcatcgccctggataaagatgcccctctgcgttttgcagagagttttgag
gtgacagtcaccaaagaaggtgagatctgtggctttaaaattcatgggcagaatgtccct
tttgatgcagtggtagtggataagtccacgggtgaggggataattcgttcaaaagagaaa
ctggactgtgagctgcagaaagactacacattcaccatccaggcctatgactgcgggaag
ggaccggatggcaccggcgtgaagaaatctcacaaagcaactgtccatatccaggtgaat
gatgtgaacgagtatgcgcccgtgtttaaggagaagtcctacaaagcgactgttgtggag
gggaagcagtatggcagcatcctgagggtggaggctgtggatgcagactgttcccctcag
ttcagccagatctgcagctatgagatcatcactccggacgtgccgtttactgtggacaaa
gatggttatataaaaaacacagagaagctaaactatgggaaagagcatcagtacaagctg
acagtcactgcatatgactgtgggaagaagagagccacagaagatgtcctggtgaagatc
agcatcaagcccacctgcactcctgggtggcaaggctggagcaataggattgagtatgag
cctggcacaggagctttggctgtcttcccaaacatccacctggagacatgtgatgagcca
gttgcttcggttcaggccacagtggaattggagaccagccacatagggaaaggctgtgac
cgagatacctactctgagaaatcccttcaccggctctgtggggctgctgctggcacggcc
gagctgcttccctctcccagcagctccttgaactggaccatcggactccctaccgacaat
ggccatgatagcgaccaggtattcgagttcaatggcactcaggcagtgaggatcccagat
ggcattgtgtccctcaaccccaaagaaccctttacaatttctgtgtggatgcggcatggg
ccttttggccggaagaaggagacaattctctgcagttcagacaaaacagatatgaaccga
caccattattcactctatgtccacgggtgcaggcttattttcctcctccgccaggatcct
tctgaagaaaagaaatacaaacctgcagaattccactggaagctgaatcaggtctgtgat
gaggaatggcaccactttgtcctcaatgtagaattcccaagtgtgactctctatgtggat
ggggtttcccatgagcccttctctgtgactgaagattacccacttcacccaaccaagata
gaaactcagcttgtagttggtgcttgctggcaagagtattcaggagttgaaagtgacaat
gaaactgagcctgtgactatggcctctgcaggtggcgacctacacatgacacagtttttc
cgaggcaaccttgctggtctaacagtccgttctgggaagctggcagataagaaggtgatt
gactgtctgtatacctgcaaggaggggctagacctccaggtccctgacgatggcggccaa
ggcgtgcagatccaagcaagccccagtcagtcagtattgaccttggagggagacgacatt
ggagagttggacaaggccatgcagcatgtgtcctaccttaactccaggcagttccccacg
cctggcatccgaaggctcagaatcaccagcactgtcaagtgttttaacgaggccgcttgc
attgaggtccccccagttgaaggctacgtgatggttttgcagcctgaggaacccaagatc
agcctgagcggcattcatcattttgcccgagcagcttcggagtttgagagctcagaaggg
gttttcctcttccctgagcttcggatcatcagcaccatcacaagagaagtggagcccgag
ggggatggggccgaggaccccacagttcaagagtccctggtgtctgaggaaattgtgcat
gacctggatacctgcgaggtcacagtggagggggaggagctgaaccccgagcaggagagc
ctggaggtggacatggcccggctgcagcagaagggcattgaagtgagccgctcgggcctg
ggtgtggtcttcacaggtgtggacaccatggccagctatgaggagctcctgcacctcctg
cgctatcggaactggcatacccggtccctgcttgaccggaagttcaagctcatttgctct
gagctaaatggccgctacctcagcaatgagtttaaggtggaggtgaatgtgatccacacg
gccaaccctatggaacatgccaaccacatggctgcacagccacagttcgttcaccctgag
catcgctccttcgtggacctgtcaggccacaacctggctaatcctcacccattcgcagtt
gtccccagcactgccacggtggtgattgtggtgtgtgtcagcttcctggttttcatgatt
atcctgggagtgtttcggatccgggccgcacatcagcgcaccatgcgggaccaggacacg
gggaaggagaacgagatggactgggacgactccgccttgactataactgtgaaccccatg
gagacatacgaggaccagcacagcagtgaggaggaagaagaggaagaggaagaggaagag
agtgaggatggtgaggaggaagaggatatcaccagtgctgagtcggagagcagcgaggag
gaggagggtggcccgggagatggccagaacgccactcggcagcagcagctggaatgggac
gactccacactgagctactag
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