Dipodomys ordii (Ord's kangaroo rat): 105997426
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Entry
105997426 CDS
T07834
Symbol
Prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105997426 (Prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105997426 (Prpf38b)
Spliceosome [BR:
dord03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105997426 (Prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
105997426 (Prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
105997426
NCBI-ProteinID:
XP_012887304
UniProt:
A0A1S3GGE7
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All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MGKLLKADTAATPARRERRGTGKRTRQPARASLIGRRRSLDRWGCYVTSAGPAILFPGAV
GGRDRAPGSPALPSCPEYSQPRISGWRGVCCLAPGSVRRLPPAPPSRASLGWGIATARAP
APGAAIHGVGSRTVVPTSERDRAWPPPPPALPPSLLQPRHGQQQPGADGQLAAAAAPGGG
GGGGGGAAKPAVSDDEPQPHDPDQHPVVALLQSAAVRAQDLPRGGGRDLLQGLTQSCSEA
RSSPGSQVEVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRK
QVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEM
LRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSP
RRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDR
GLDRRHSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDREYDKERGIDREKERD
RSRERSKERRSRGEVEEKKHKEDKDDRRHREDKKDSKKEKKHSRSRSRERKHRSRSRSRN
AGKRSRSRSKERSSKHKNENKEKSNKRSRSGSQGRTDSIEKKKQHSPSKEKSRKRSRSKE
RSHKRDHDSKDQPDKRRRSQSVEQESQEKPQKNKDETV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggggaaactcctcaaagccgacactgcagcgactccggcacgcagagaacggcgcggc
accgggaagaggacgcgccagcccgctcgggcgtctctgattggccgccggcgtagcttg
gatcgctgggggtgttacgtcacatccgccgggcccgccatcttgttcccaggggcagtt
ggcggaagagatcgcgctccggggtcgccggctttgccttcttgcccggagtactcgcag
ccccgcatctcggggtggcggggcgtctgctgtctagccccgggatccgttcgtcgactt
ccccccgccccgccctcccgtgcctcgcttggctggggcatagccacagcgcgggcccca
gctcctggggcggcgatccatggagtagggtcccggaccgttgtcccgacgagcgagcgc
gaccgagcgtggccccctcccccgcccgccctccctccctccctcctccagccgcgacat
ggccaacaacagcccggcgctgacgggcaactcgcagccgcagcagcaccaggcggcggc
ggcggcggcggcggcggggccgccaagcccgcggtgtcggacgatgaacctcaaccccat
gatcctgaccaacatcctgtcgtcgccctacttcaaagtgcagctgtacgagctcaagac
ctaccacgaggtggtggacgagatctacttcaaggattgactcagtcttgcagcgaggct
cggagcagcccagggtcgcaggtagaggtcacacatgttgagccatgggagaaaggaagc
agaaaaacagctggccagacggggatgtgcggaggggttcgaggtgttggaacaggaggg
attgtttctacagctttttgcctgttatacaaattatttactttgaagttaactcgaaag
caagtgatgggtcttataacacatacagactctccatatattagagcccttggatttatg
tatataaggtatacacagccccctacagacctgtgggactggtttgagtctttccttgat
gatgaagaggacctagatgtgaaggctggtggaggctgtgtaatgaccattggagaaatg
cttcggtcttttctcacaaaactggagtggttttctactttgtttccaagaattcctgtt
ccagttcagaagaacattgatcaacagattaaaactcgacctaggaaaatcaagaaagat
ggaaaagaaggtgctgaagaaatagacagacatgtggaacgcaggcgttcaagatctcca
aggaggtctctgagtccacggagatccccaagaagatcaagaagcagaagtcatcatcgg
gagggccatgggtcttctagttttgacagagagttagaaagagagaaggaacgccagcgg
ctagagcgggaagccaaagaaagagaaaaagaaaggcgaagatcccgaagtattgatcgg
gggttagatcgtaggcatagcaggagtagggaaaggcataggagccgcagtcggagtcga
gataggaaaggggacagaagagacagggatcgggaaagagagaaagaaaatgagagaggg
aggagacgagatcgagagtatgataaggaaagaggtattgatcgagaaaaggagagggac
cggtccagagaacgctccaaggaacggagaagtaggggggaggtagaagagaagaaacat
aaagaagacaaagatgataggcggcatagagaggacaaaaaagattccaagaaagaaaaa
aaacacagtagaagtagaagcagagagaggaaacaccggagtcggagtcgaagtagaaat
gcagggaaacgaagcaggagcaggagcaaagagagatcaagtaagcacaaaaatgaaaac
aaagaaaaatcaaataaacgaagtagaagtggcagtcaaggaagaactgacagtattgag
aaaaaaaaacaacatagtcccagcaaagagaaatctagaaagcgtagcagaagcaaagaa
cgttcccacaaacgagatcatgatagtaaggaccagccagacaagcgtcggaggagccaa
agtgttgaacaagagagccaagaaaagccacagaaaaacaaagatgagactgtgtga
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