Dipodomys ordii (Ord's kangaroo rat): 105997510
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Entry
105997510 CDS
T07834
Symbol
Dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105997510 (Dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105997510 (Dhx8)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105997510 (Dhx8)
Spliceosome [BR:
dord03041
]
Complex C
Other components
Step II factors
105997510 (Dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
Sigma54_activ_2
PhoH
TsaE
ABC_tran
nSTAND_NTPase5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
105997510
NCBI-ProteinID:
XP_012887398
Ensembl:
ENSDORG00000013845
UniProt:
A0A1S3GEW2
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MAVAVATAGILMASEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKSSLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVKPKTEKEKLKELFPV
LCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDTEHRDRTKKKKRSRSRS
RDRDRDRDRERERDRDRDRDRERDRDHKRRYRSRSRSHSRTRERNKGKSRYRSRSKSHSP
LKDRKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRW
EGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRR
RNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVL
SKEEFPDFDEETGILPKVDDDEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGS
LSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMM
PNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG
SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC
TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM
KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE
PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG
SRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA
GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKMAEFPLEPMLCKMLIMSV
HLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKF
SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAK
KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA
PAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggctgtggccaccgcgggaatcctgatggcctcggagccaggccctgcggag
gagctcgccaaactcgaatatttgtctttggtatcgaaggtttgcacggaactggacaat
cacttagggatcaacgacaaggatctagctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatacatttaagtcttcccttgtcaaaaatggagcagaattcacagattct
cttattagtaatctacttcgactcatacaaactatgcgccctccagcaaagccttctact
agcaaagatccagttaaacccaaaacagaaaaagaaaagctgaaagaactcttcccggtc
ctttgccagccagacaacccatctgttcggaccatgctggatgaagatgatgtgaaggtt
gccgtggatgtcttaaaggaactggaagccttaatgcccagtgcagcaggccaagagaag
cagagagacactgaacaccgggacaggacaaagaaaaagaagcggagtcggagccggagc
cgagatcgagaccgtgaccgtgaccgagagcgagagcgagatagagaccgagacagagac
agagagcgagacagagaccacaagcggagataccgatcccgctctcgatcacattccagg
acccgagagagaaataaagggaagtctagatatcggtccaggagcaagagtcacagcccc
ctcaaagaccgaaaggacagggataagtatggagagagaaatctggacagatggcgggat
aagcatgtggaccgccctccccctgaggagcctgccatcggggacatttacaatggcaaa
gttaccagcatcatgcagtttggatgctttgtacagctggagggactaaggaagcggtgg
gaaggcctggtgcatatctctgagcttcggcgggaaggccgtgtggccaatgttgctgat
gtagtgagcaaaggccagagagtcaaagtcaaagtgctgtccttcactgggaccaagacc
agcttgagcatgaaggatgtagatcaagagacgggagaagatctaaacccaaatcgacgg
cgaaatctggttggggagaccaatgaggagacttcaatgcggaatccggacagacccact
cacctctcccttgtcagtgcccccgaagtagaggatgactctctggagcgcaagcgcctc
acccgcatctctgacccagagaagtgggagatcaaacagatgattgctgccaatgtcctt
tccaaagaagagtttccagactttgatgaagagactggcatccttcctaaggtggatgat
gatgaagatgaggaccttgagattgaactggttgaggaagagcctccattcctgagaggt
cacaccaagcaaagcatggacatgagccccatcaaaattgttaagaacccagatggttcc
ctctcccaggctgccatgatgcagagtgctttggccaaggaaaggcgggaactcaagcaa
gcccagcgggaagcggagatggattctattcccatgggactcaacaaacactgggttgat
cctttgcctgatgcggaaggcaggcagattgctgccaacatgaggggtattggaatgatg
cccaatgacattcccgagtggaagaagcatgcctttgggggcaacaaagcttcttacggg
aaaaagacccagatgtccatcctcgagcagagggagagcctgcccatctataaactgaag
gagcagctggtccaggctgttcatgacaatcagatcctaattgttattggagagacagga
tctgggaagacaacgcagattacccagtacctagcagaggcaggctacacttccagaggc
aagattgggtgtacacagccaagaagagtggcagccatgtccgtggccaaaagagtatca
gaggaatttggttgttgtttaggtcaagaggtgggctataccattcgatttgaggactgc
accagtcccgagacagtcatcaagtacatgacagatggcatgttgctcagggaatgcctg
attgaccctgacctcactcagtacgccatcatcatgttggacgaggcccatgaaagaaca
attcacacagacgtgctttttgggttgctgaaaaagacagttcagaaacggcaggacatg
aagctgattgtcacttcagctaccttggatgcagtgaagttttctcagtacttctatgaa
gcacccatcttcaccatcccaggccgaacttacccagtggaaatactgtacacaaaggaa
cctgagacagattacctggatgccagcctcattactgtcatgcagatccacttaactgag
ccaccaggtgatattttggtcttcctgactggtcaggaagagattgatactgcttgtgag
atcctatatgaaagaatgaaatccttgggacctgatgttccagagttaattatccttccg
gtgtactctgctcttcccagtgagatgcagacccggatctttgacccagctcctcctggc
agcagaaaggtcgtgattgccaccaacattgcagaaacatcactgactatcgatggcatc
tactatgtggtggaccctgggtttgtgaagcagaaagtttacaattctaagacagggatt
gaccagctggtggtgacgcctatttctcaggctcaggctaagcaacgagctggcagagct
gggagaaccggcccagggaagtgttacaggctgtacacagaacgtgcctaccgagatgaa
atgctgaccaccaacgtgccagaaattcagagaaccaacttggcaagcactgtactgtcc
ctcaagatggcagagttccctctagaaccaatgctgtgcaaaatgctcatcatgtctgta
catctgggctgcagtgaagaaatgctgaccattgtgtccatgctgtcagtgcagaatgtc
ttttacaggcccaaggataagcaagccctcgcagatcagaagaaggccaaattccaccag
actgaaggggaccatctcacccttctggctgtgtacaactcctggaaaaacaacaagttc
tccaacccatggtgctacgagaactttatccaggcccgttccctgcgccgggcccaggac
atccgtaagcagatgttaggcataatggacagacacaagctggatgtggtgtcctgtggc
aagtccacagtccgagtgcagaaggccatctgcagtgggttcttccgtaatgctgccaag
aaagacccgcaggagggctataggaccctgatcgaccagcaggtggtttacatccaccct
tccagtgcgctcttcaacagacagccagaatgggtggtgtatcatgaactggtgctgacc
acaaaggagtacatgcgtgaagttaccaccattgacccccggtggctcgtggagtttgcc
ccagccttcttcaaggtctctgatccaaccaagctaagcaagcagaagaagcagcagaga
ctcgaacccctatacaaccgctacgaggagccaaatgcctggagaatatcccgggccttc
cggcgacgctga
DBGET
integrated database retrieval system
