Dipodomys ordii (Ord's kangaroo rat): 105997563
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Entry
105997563 CDS
T07834
Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04371
Apelin signaling pathway
dord04613
Neutrophil extracellular trap formation
dord05034
Alcoholism
dord05203
Viral carcinogenesis
dord05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
105997563 (Hdac5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
105997563 (Hdac5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
105997563 (Hdac5)
05203 Viral carcinogenesis
105997563 (Hdac5)
09165 Substance dependence
05034 Alcoholism
105997563 (Hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dord03036
]
105997563 (Hdac5)
Enzymes [BR:
dord01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105997563 (Hdac5)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
105997563 (Hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
105997563
NCBI-ProteinID:
XP_012887481
Ensembl:
ENSDORG00000016382
UniProt:
A0A1S3GF83
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMLGREPPLEILPRTPLHSIPVAVEVKPVLPGA
MPSPMGGGGGGSPSPVELRGALAGPVDPVLREQQLQQELLVLKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHSKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGAGPGVSSVCNSAPGSGPSSPNSSHNTIAENGFTGSVPNIPTEMLPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQG
STLTGGTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPL
HGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQK
QQQQLQLGKILTKTGELPRQPTTHPEETEEELTEQQEALLGEGAVTMPREGSTESESTQE
DLEEEEEEEEEEDEDCIQVKDEEGESGPEEGPDLEESSASYKKLFTDAQQLQSLQVYQAP
LSLATVPHQALGRTQSSPAAPGGMKSPPDQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHP
EHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSK
KLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFA
IIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDP
SVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVV
MPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMKLAGGRVVLALEGG
HDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVTTLEKVIEIQSKHWSCVQRFA
AGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAAREHSPR
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggcgcaggggctcgtggagatgctgcagaccatctacgagacc
gagtcctgtttctcagcagatggcatgttaggccgggaaccacccttggaaatcctgccg
cggactcctctgcacagcatccctgtggcagtggaggtgaagccagtactgccaggagcc
atgcccagccccatggggggcgggggtggaggcagccccagtcctgtggagttgcggggg
gctctggctggccctgtggaccctgtgctccgggagcagcaattgcagcaggaactcctg
gtgctcaaacagcagcagcagctgcagaagcagctcctgtttgctgagttccagaagcag
catgaccacctgacacggcagcatgaggtccaactacagaagcacctcaagcagcagcag
gagatgctggcggccaagcggcaacaggaactggagcagcagcggcaacgggagcagcag
cggcaggaggagctggagaagcagcggctggagcagcagctgctcatcctgcgcaacaag
gaaaagagcaaagagagtgccatcgccagcactgaggtgaagctgaggctccaagaattc
ctcttgtcaaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcac
tccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagcggc
ccccctgggacgcctccctcttataaactgcctttgcttgggccctatgacagccgtgat
gacttccccctccgcaaaacagcctctgaacccaacttgaaagtgcgttcgaggctaaaa
caaaaggtggctgagcggagaagtagtccccttctgcgtcgcaaggatggaactgttatt
agcacctttaagaagagagcagttgagatcacaggcgctggacctggggtgtcgtccgta
tgtaacagtgcgcccggctccggccccagctctcccaacagctcccacaacaccatcgct
gaaaatggctttaccggctcagtccccaacatccctaccgagatgctcccccagcaccgg
gccctccctctggacagctcccccaaccagttcagcctctacacgtctccctctctgccc
aacatctccctagggctgcaggccacggtcactgtcaccaactcgcacctcactgcctcc
ccgaagctgtcaacacagcaggaggctgagaggcaggctcttcaatccctgcgccagggc
agcacactaactgggggcacattaacgggcaagttcatgagcacatcttccatccctggc
tgcctgctgggcgtggcactggagggtgacacaagcccccatgggcacgcctcattgctg
cagcatgtgctgctgctagagcaggcccggcagcagagcaccctcatcgctgtgccactg
cacgggcagtccccattggtgactggtgaacgtgtggccaccagcatgcggacagtgggc
aagcttccaaggcaccggcccctgagtcgcacccaatcctcgccactgccacagagtccc
caggccctgcagcagctggtcatgcagcagcagcaccagcagtttctggagaagcagaag
cagcagcagcagctacagctgggcaaaatccttaccaagactggggagctgcccaggcag
cccactacccaccctgaggagacagaagaggagctaaccgagcagcaggaagccttgcta
ggagagggcgctgtgaccatgccacgggaaggctccacagaaagtgagagcactcaggaa
gacctggaagaagaagaggaggaagaagaagaggaagatgaggactgcattcaggtcaag
gatgaagagggagaaagtggccctgaggaggggcccgacttggaggagtccagtgccagt
tataaaaagctgttcacagatgcccagcagctgcagtccctgcaggtgtaccaggcaccc
ctcagcttggccactgtgcctcaccaagccctgggtcgcacccagtcctcacctgctgct
cctggaggcatgaagagccccccagatcagcccaccaagcacctcttcaccactggtgtg
gtctatgacacgttcatgctgaagcaccagtgcatgtgcgggaacacacacgtgcacccc
gagcacgctggccgcatccagagtatctggtcccggctgcaggagaccggcctgctcagc
aagtgcgagcggattcggggtcgcaaagccaccctggatgagatccagacagttcactct
gaataccataccctgctctatgggaccagccccctcaaccgacagaaacttgacagcaag
aaactgcttggccccatcagccagaagatgtatgccatgctgccttgcgggggtattggg
gtggacagtgacaccgtgtggaacgagatgcactcctccagtgctgtgcgcatggcagtg
ggctgcctggtggagctggccttcaaggtggctgcaggagagctcaagaatggatttgcc
atcatccgacccccaggacaccatgctgaagagtccacagccatgggattctgcttcttc
aactccgtagccatcacagctaaactcttgcagcagaagttgaatgtgggcaaggtcctc
atcgtggactgggacattcaccatggcaatggtacccagcaagcgttctacaatgacccc
tctgtgctctacatctccctgcatcgctatgacaacgggaacttttttccaggctctggg
gctcctgaagaggtcggtggagggccaggtgtggggtacaatgtgaatgtggcatggaca
ggaggtgtggacccccccatcggagacgtggaatacctgacagccttcaggacagtggtg
atgcccattgcccacgagttctcacctgacgtggtcctagtctctgctgggtttgatgct
gttgaagggcatctgtctccactgggtggctattctgtcaccgccagatgttttggccac
ttgaccaggcagctgatgaagctggctgggggccgggtggtgctggccctggagggaggc
catgacttgaccgccatctgtgatgcctctgaggcctgtgtttcagctctgctcagcgtg
gagctgcagcctttggatgaggcagtcttacagcaaaagcccaacatcaacgcagtgacc
acacttgagaaagtcatcgagatccagagcaaacactggagttgtgtgcagaggtttgct
gctggtttgggtcgctctctgcgggaggctcaggcaggtgagactgaggaggccgagact
gtgagcgccatggccttgctgtcagtgggggctgaacaggcccaggctgctgctgcccga
gaacacagccccaggtaa
DBGET
integrated database retrieval system
