Dipodomys ordii (Ord's kangaroo rat): 105997816 Help Entry 105997816         CDS       T07834                                  Symbol Hdac6 Name (RefSeq) histone deacetylase 6   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism dord  Dipodomys ordii (Ord's kangaroo rat) Pathway dord04613   Neutrophil extracellular trap formation dord05014   Amyotrophic lateral sclerosis dord05034   Alcoholism dord05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:dord00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     105997816 (Hdac6)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     105997816 (Hdac6)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     105997816 (Hdac6)   09165 Substance dependence    05034 Alcoholism     105997816 (Hdac6)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:dord01009]     105997816 (Hdac6)   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dord03019]     105997816 (Hdac6)    04131 Membrane trafficking [BR:dord04131]     105997816 (Hdac6)    03036 Chromosome and associated proteins [BR:dord03036]     105997816 (Hdac6) Enzymes [BR:dord01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      105997816 (Hdac6) Protein phosphatases and associated proteins [BR:dord01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      105997816 (Hdac6) Messenger RNA biogenesis [BR:dord03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      105997816 (Hdac6) Membrane trafficking [BR:dord04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     105997816 (Hdac6) Chromosome and associated proteins [BR:dord03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      105997816 (Hdac6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Hist_deacetyl Motif Other DBs NCBI-GeneID:  105997816 NCBI-ProteinID:  XP_012887805 UniProt:  A0A1S3GGG6 LinkDB All DBs Position Unknown AA seq 753 aa AA seqDB search MTSTCQDSTASRQRKGRQNPQSPSHDVNAITKRTVKKGAVPRCTPNLSEIKKKGKMKKLS QPVEEDLVMGLQGLDLNPEVKVMIGTGLVFDEQLNDFHCLWDDSYPENPERLHAIKEQLI QEGLVDRCVCFPARVAEKEELMLVHSPEYIDLMETTQYMNEGELRILASTYDSVYLHPNS FICACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQRDLMGGYCMFNHVAVAARYAQR KHHIKRVLIVDWDVHHGQGTQFMFDQDPSVLYFSIHRYEQGRFWPHLQASNWSAIGCGQG QGYNINIPWNQVGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALQGDPKGEMAATP AGFAQLTHLLMGMAGGKLILSLEGGYNLQSLARGVSASLHTLLGDPCPMLESPGAPCQSA QASVSCTLEALEPFWEVLVNTVDSTEEDNEAGDNWDERQEEGEGPLGATSLPVLTWPTLQ HRTGLVYDQRMMSHCNLWDNHHPETPQRILRIMCHLEELGLAARCLHLPVRPATDAELLT CHSAQYVERLRATETMKSRELHREGANFDSIYICPSTFTCAQLATGAVCRLVEAVLSGEV LNGIALVRPPGHHAEHDAACGFCFFNSVAVAARHAQAIRGTALRILIVDWDIHHGNGTQH IFENDPSVLYMSLHRYDRGTFFPMGDEGSSKHVGLAEGMGFTVNVAWNGPRMGDADYLAA WHRLVLPIAYEHVSDCQVSDPVRQPVVGDSNDS NT seq 2262 nt NT seq  +upstreamnt  +downstreamnt atgacttccacctgccaggattccacagcctccaggcagcggaagggtaggcagaatccc caatcgccttctcacgatgtgaacgccatcacgaagagaactgttaagaagggtgctgtg ccccgctgtactcccaatctatcggagataaagaagaaaggaaagatgaagaagcttagc caaccagttgaagaagacctagtcatggggctgcaagggctggatcttaaccctgaagtg aaggtaatgattggtactggcttggtgtttgatgaacagctaaatgattttcattgcctc tgggatgacagctaccctgaaaaccctgaaagactccatgccattaaggagcagcttatc caggaaggccttgtggatcgttgtgtatgctttccggcccgggtcgcagaaaaggaagag ctcatgttggttcacagcccagagtacattgacctcatggagacaacccagtacatgaat gagggagaacttcgcatactggcaagcacctatgattcagtttatctacatccgaactct tttatttgtgcctgtctggcctcaggctctgtccttagactagtagatgctgtcctggga gctgagatccggaatggcatggctatcatcagacctccaggacaccatgcgcagcgtgat ctgatgggtgggtattgcatgttcaaccatgtagctgtagctgctcgttatgctcaaagg aagcaccacattaagagggtccttattgtggactgggacgttcatcatggccaaggaaca caattcatgtttgaccaggatcccagtgttttatacttctccatccaccgctatgagcag ggtcggttctggccccacctccaggcctctaactggtctgccataggttgtggccaaggg caaggatacaacatcaatataccttggaatcaggtggggatgcgggatgcggactacatt gctgcttttctccacatcttgttgcctgttgcttctgagtttcagcctcaactggtcctg gtagctgctggatttgatgccctccaaggggaccccaagggcgagatggctgccacccct gcagggtttgcccagttaacccatctgctcatgggtatggcaggaggcaagctaattctg tctctggaaggtggatacaacctccagtctctggctaggggtgtcagtgcatctctccat acccttctgggagacccttgccctatgctagagtcccctggtgcaccatgtcaaagtgct caggcttcggtctcctgtactctggaagccctggaaccattctgggaagtccttgtgaat acagttgatagtacggaggaggacaatgaggctggagacaactgggacgagagacaagag gaaggggaaggacccttgggggccacttcactgccagtcctgacatggcccacgctacag catcgtacaggattggtctatgaccaaagaatgatgagtcactgcaacctgtgggacaac caccaccctgagacaccccagcgtattttgcggatcatgtgccacttagaggaactaggg cttgcagcacgctgtctccacctgcctgtgcggcctgccactgatgccgagctccttacc tgccacagtgcccagtatgtagagcgtctccgggctacagagacaatgaaaagccgggaa ctgcaccgcgagggtgccaactttgactccatctacatctgccccagcacattcacctgt gctcagctagctacaggtgcagtctgccgcctggtggaagctgtactatcaggagaggtt ttaaatggcattgctctggtgcgcccccctggacaccatgcagagcacgatgctgcttgt ggcttctgcttttttaattctgtggctgtggctgctcgccatgcccaagccattaggggg actgccttaaggatcctaattgtggattgggacatccatcatgggaatggaactcagcac atctttgagaatgaccccagtgtgctttatatgtccctgcaccgctatgatcgtggcact ttcttccccatgggggatgaggggtccagcaaacacgtaggtctggctgagggcatgggc ttcactgtcaatgtggcctggaatgggccccgtatgggtgatgctgactacctggctgca tggcatcgacttgtgcttccaattgcatacgagcatgtgtctgactgccaggtgtctgat cctgtgagacagcctgtggttggagatagtaatgactcttga

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