Dipodomys ordii (Ord's kangaroo rat): 105997846
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Entry
105997846 CDS
T07834
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03013
Nucleocytoplasmic transport
dord03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105997846 (Srrm1)
03015 mRNA surveillance pathway
105997846 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105997846 (Srrm1)
03041 Spliceosome [BR:
dord03041
]
105997846 (Srrm1)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105997846 (Srrm1)
Spliceosome [BR:
dord03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
105997846 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
105997846
NCBI-ProteinID:
XP_012887849
UniProt:
A0A1S3GI00
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQVTLFSLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKSPELPEPSVKIKEPSVQEATS
TSDILKAPKPEPIPEPKEPTPEKNSKKEKEKEKTRQRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKTRHSPTPQQS
NRTRKSRVSVSPGRASVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMTAADSVQQR
RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKHQKETSP
RMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRPSPSPPPKRRVSHSPPPKQRSPPA
TKRRSPSLSSKHRKGPSPSRPAREARSPQPNKRHSPSPRPRAPHTSSSPTPVRRGPSASP
QRRQSPSPSTRPIRRVSRTPEPKKPKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPP
SPIQSQSPSTNWSPAVPVKKAKSPTPSPSPARSNTFFWVFQETESEAEDNLDDLEKHLRE
KALRSMRKAQVSPQS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcgggacaagtgcagaacaggacaatcggtttagcaacaaa
cagaagaaactactgaaacaactgaaatttgcagaatgtctagagaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcctctgctgttaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactgaagaaagaagaaataaaacagagacaagtaacccttttttct
cttgcntcgatgaaaaagcaagatgaagacaaagataagagggataaagaggaaaaagag
agcagcagagaaaaaagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggagaaaagt
ccagagcttccagaaccttcagtgaaaataaaagaaccttcagtacaagaggccacatct
actagtgacatcctgaaagctcccaagcctgaacctataccagagcctaaagaaccgact
ccagaaaagaattccaaaaaagaaaaggaaaaggaaaagacccgacaaagatctcggtca
cgttccaagtcaagatcccgtacacgttctcgctcaccgtctcatactcgaccaagacgg
cgccatagatcccgatcaagatcgtactcacctagaaggcggcccagtccaaggagacgg
ccttctcctcgaagaagaaccccaccaagacgaatgccgcctccaccaaggcacaggagg
agcaggtctcctgggagacgaaggaggcgttcatcagcatccttgtctgggagtagttca
tcatcctcatcatctcgttcccggtcaccaccaaagaagcctcccaagagaacatctagc
cctcctcgaaaaactcgcaggttatctccttctgcaagtcctccaaggcgaaggcacagg
ccatcacccccagcatctccaccaccaaaaactcggcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtgtctccggggagagcttcagtgacaaaacat
aaaggtactgaaaaaagagagtcgccttcaccagcaccaaagcctagaaaagtagagtta
tctgaatcagaagaagataaaggtggcaagatgactgcagctgattctgtgcagcagagg
cgtcaatacagacgacagaaccagcagtcttcatctgactctggatcttcctcctcctca
gaagatgagcggcccaagagatcccatgtgaagaacggtgaggtaggcaggcggcggaga
cattccccttcccggagtgcttctccatctccaagaaagcatcagaaagagacctcccct
cggatgcagatgggaaagcgatggcaatcgccagtgactaaaagtggtagacgaaggaga
agtccctccccaccacccaccagaaggcgacgttctccttctcctgcccctcctccgcgg
cggcgcaggtctcccacaccaccaccacgtcgaaggacgccttcaccaccaccacgtcgg
cgctcgccttccccaagaagatactctcctccaatacagagacgatactctccttctcca
cctcccaagagaaggacggcctctcccccaccccctcccaaacgaaggccatcaccgtct
ccaccaccaaagcgccgggtctcccattctccacctcccaaacagagaagccccccagcc
accaagagacggtcaccttctttatcttcaaagcataggaaagggccctctccaagccgc
cctgcccgggaagcccggtcaccacagccaaacaaacggcattcgccctcaccgcggcct
cgagctccccacacctcctcaagtcctacccccgttcgaagaggaccttctgcatcaccc
caaagaagacagtccccatctccaagtactaggcctattaggagagtctccagaactcca
gaaccgaaaaagccaaaaaaggctgcctcacctagcccacagtctgtaagaagggtctca
tcttcccgatctgtttctggatctcctgagccagcagctaaaaagcctccagcacctccg
tcccctatccagtctcaatcaccttctacaaactggtcaccagcagtaccagtcaaaaag
gctaaaagcccaacaccaagcccctcaccggccagaagtaacacttttttctgggttttt
caggagacagagagtgaagctgaagacaaccttgatgacttggaaaagcacctgcgggaa
aaggccctgagatccatgcgcaaggctcaagtgtccccacagtcttag
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