Dipodomys ordii (Ord's kangaroo rat): 105997989 Help Entry 105997989         CDS       T07834                                  Symbol Sympk Name (RefSeq) symplekin   KO K06100   symplekin Organism dord  Dipodomys ordii (Ord's kangaroo rat) Pathway dord03015   mRNA surveillance pathway dord04530   Tight junction Brite KEGG Orthology (KO) [BR:dord00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     105997989 (Sympk)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     105997989 (Sympk)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dord03021]     105997989 (Sympk)    03019 Messenger RNA biogenesis [BR:dord03019]     105997989 (Sympk) Transcription machinery [BR:dord03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      105997989 (Sympk) Messenger RNA biogenesis [BR:dord03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      105997989 (Sympk)     U7-dependent histone pre-mRNA processing factors      105997989 (Sympk) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SYMPK_PTA1_N Symplekin_C PDS5 Cohesin_HEAT Cnd1 Motif Other DBs NCBI-GeneID:  105997989 NCBI-ProteinID:  XP_012888039 UniProt:  A0A1S3GII2 LinkDB All DBs Position Unknown AA seq 1210 aa AA seqDB search MASTSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD ENVNVVKKAILTMTQLYKVALKWMVKSRVINDLQEACWDMVSAMAGDIILLLDSDNDGIR THAIKFVEGLIVTLSPRVADSEVPRRQEQDISLERIPRDHPYIQYNVLWEEGKAALEQLL KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDADSTLKKM KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV YLPETMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRVKILASLVTQFDSGL KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEACLLRLLSGLQERPDQK DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLICKRPSRQFQYLHVLLDL SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL SRLIMKQRQQAHIPNSIMTILEASGKQEPDAKEPQAGPLEEDDLEPLALAPAPAPRPPQD LMGLRLAQEKALKRQLEEEQKLKPPAPAAAPARPGPPPASEEAVDFREEGPEGETPAIFI SMDDDSGLTEAALLDSSLDGSLPKEAAPGAPASKEEPRSPPSLGPAGDEAAKTPSPAAEE AGEPETQGNS NT seq 3633 nt NT seq  +upstreamnt  +downstreamnt atggcgagcaccagtggggacagtgtcactcgccggagtgtggcatcccagtttttcacc caggaggaagggccaggcattgatggcatgaccacctcagagagggtggtggatctcctg aaccaagcagcgctgatcaccaatgactcaaagatcacagtgctcaaacaggtccaggag ctgatcattaacaaagaccccacgctgctggacaacttcctggatgagatcatcgcattc caagcagacaagtcgatcgaagtgcgaaaatttgtcattggcttcatcgaggaggcatgc aagcgagacatcgagttgctgctaaaactgatcgccaacctcaacatgctcctgcgagat gagaacgtgaacgtggtgaagaaggccatcctcaccatgacgcagctctacaaggtggcc ctgaagtggatggtgaagtcccgggtgatcaacgatctccaggaggcctgctgggacatg gtgtcggccatggctggggacatcattctgctcttagactctgacaacgatggcatccgc acccatgccatcaagtttgtggagggccttatcgtcaccctgtcgccgcgcgtggccgac tcagaggtaccccgacgccaggagcaagacatcagcctggaacgcatccctcgagaccac ccctacatccagtacaatgtgctatgggaagagggcaaagcagccctggagcagctcctc aagttcatggtgcacccagccatctcctccatcaacctgactacggctctgggctccctc gccaatatcgcccgccagagacccatgttcatgtctgaagtgatccaggcctatgagact ctgcacgccaacctgcccccaacgctggccaaatctcaggtgagcagcgtgcgcaagaac ctgaagctgcacttactgagtgtgctcaagcacccggcctccttggaattccaggcccag atcaccactctgctggtagacctgggcacaccccaggcggagatcgcccgcaacatgccg agtggcaaggacgcccgcaagcggccccgggatgatgctgattccacactcaagaagatg aagctggagcccaacctaggggaagatgatgaggacaaggacttggagcctggcccgtca gggacctcaaaggcctcagcccagatctcaggccaatcagacacagacattacagcagaa tttctgcagcccctgctgacgcccgataatgtggctaatctggtcctcatcagcatggtg tacctgcccgagaccatgcctgcctccttccaagccatctacacccctgtggagtccgcc ggcaccgaggcccagatcaagcacttggctcgcctcatggccacacagatgacagctgca gggctgggtccaggtgtggagcagacgaagcaatgcaaggaggagcccaaggaggagaag gtggtgaagccagagagtgtcctgatcaagaggcgcctgtcggctcagggccaggccatc tcggtggtgggctctctgagctccatgtccacactggaggaggaggcaccccaggccaag aggcggccggagcccatcatccctgtcacacagccccggctggcaggtgctggtgggcgc aagaagatatttcgtctgagcgatgtgctgaagcccctgacagatgcccaggtggaggcc atgaagctgggtgctgtgaagcggattctgcgggccgagaaggcagtggcctgtagtgga gcggcccaggtacgtgtcaagatcctggccagcctggtgacgcagtttgactcaggcctc aaggctgaggtcctgtccttcatccttgaggatgtgcgggcccgcctggacctggccttt gcctggctctaccaggagtacaatgcctacttagccgctggtgcctcgggcacactggac aaatacgaggcctgcctactgcgcctgctctctggcctgcaggagagaccagaccagaag gacgggatcttcaccaaggtggtgctggaggccccgctcatcaccgagagcgccctggag gtcattcgcaagtactgtgaggatgagagccgcacctacctgggcatgtccacgctgcgg gacctgatctgcaagcgcccgtcccgccagttccagtacctgcatgtcctcctggacctc agctcccatgagaaggacaaggtgcgctcccaggccctgctgttcatcaagcgcatgtac gagaaggagcagctgcgcgagtacgtggagaaattcgccctcaactacctgcagcttttg gttcatcccaaccccccatccgtgctgtttggagctgacaaggacacagaggtggctgcg ccctggacggaggaaacagtgaagcagtgtctgtacctctacctggccctcctacctcag aaccacaagctgatccacgagctggcggccgtgtacacagaggccatcgctgacatcaag cgcacggtgctgagggtcatcgagcagccgatccgagggatgggcatgaattcgccggag ctgctgctgctggtggagaactgccccaagggagcagagacgctggtcacacgctgcctg cacagcctcactgataaagtgccaccctccccagagctggtgaagcgggttcgagacctc taccacaagcggctgcctgatgtccgcttcctcatccctgtgctcaatggactggagaag aaagaggtgatccaggccctgcccaagctcatcaagctcaaccccatcgtggtgaaggag gtcttcaaccgcctgctgggcacccagcacggcgaaggaaactcggccttgtccccgctg aaccccggagagctcctgattgcgctgcacaacattgactctgtgaagtgtgacatgaaa tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg ctggctgtggtaatgcagcagctgatggagcagagcccgctgcccatgctgctcatgagg accgtcatccagtccctcaccatgtacccccgcctggggggcttcgtcatgaacatcctg tcccgcctcatcatgaagcagcgccagcaagcacacatccccaactccattatgaccatc ttggaggccagcggcaagcaggagcccgacgccaaggagcctcaggccgggcccctggag gaggacgacctggaacctctggctctggccccggccccggccccccggcccccccaggac ctcatgggcctgcggctggctcaggagaaggccctgaagaggcagctggaggaggagcag aaactgaagccccccgcgcccgccgcggcccccgccaggcccgggcctccgcccgcctcc gaggaggccgtggacttccgggaggaggggcccgagggcgagaccccggccatcttcatc agcatggacgacgactcggggctgactgaggctgcgctcctggactccagcctcgacggc tccctgcccaaggaggcagcccccggagcgcccgcctccaaggaggagccgcggagcccg ccaagcctcggccccgcgggggacgaagccgccaagacccccagcccggccgcggaggag gcgggggagcctgagacccaggggaacagctga

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