Dipodomys ordii (Ord's kangaroo rat): 105998083
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Entry
105998083 CDS
T07834
Symbol
Cic
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
105998083 (Cic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dord03000
]
105998083 (Cic)
Transcription factors [BR:
dord03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105998083 (Cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
105998083
NCBI-ProteinID:
XP_012888140
Ensembl:
ENSDORG00000008822
UniProt:
A0A1S3GHF8
LinkDB
All DBs
Position
Unknown
AA seq
2516 aa
AA seq
DB search
MKPMKKACTSLSGPGSGSKSPPATRAKALRRRGAGESDKPEEEEEETQPQQQPGPEEAEE
GEEEEAAERGSGSEGPPPELHPSDPASGPAEDPKGDGEAGRWEPSLSRKTATFKSRAPKK
KYVEEHSAAGGGVTGAPEEQQERTPEEASVLGVPPQPPASTRSSSTDTASEHSADLEEES
AEACGPGPWPPGGPSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRA
LTFYEGLPGSGVDVVLDATPPPGALVVGTAVCTCVEPGVAAYREGVVVEVATKPAAYKVR
LSPGPGSQAGPPGSLPQPQPPLHNREPEEAVWVARSSLRLLRPPWEPEVLLRKPPIGPEE
EQAEPGTTLPPCPAPLDPKQPEDAEVSKISFGGTLGVHCEEGEEKHPPALGTPALLPLPP
PQLLSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAAQ
QKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADG
GPGGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECE
AAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAV
RSRHLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTEL
LPHPGTLGAPGAGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQ
PSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFSGEVGTAGEVRAGG
PGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAF
HPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQP
DPSVQPSEAQQPASHPVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGPG
PPHTLGMVEPGKGPLPTTEEETPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKR
RTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRT
VSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPASLGLA
GGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDSKAAGSGPCGAERLHAVGGPGS
ARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPTSYSGPKPPTQYGTPGPFAAPGEGGA
LAASGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKE
RVTDSESGDSSGEDPEGNKGFGRKLFSPVIRSSFTHCRPTLDPEPPGPPDPPAAFGKGYG
PTSSSSSSPATTSTSVANSFSLGSGSFKAQESGQGSTTGPLRPPPPGPGGPATPSKATRF
LPSDPASFRRKRPESVGSLEPSGPSVIAVPPSGGGTILQTLVLPQNKEDREGSGARVPSA
SAPSLSYGASAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPSSGRTEASPNDTAGARTE
MSTGSRVPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGY
GAPAPPAVQFIAQGAPGGGPTAGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYILP
TLPQQLQVAPAPGPPAPGAKAAAPTGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPIL
QSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGPGQPLPLVSPPF
SVPVQNGAQPPSKIIQLTPVPVSTPGGLVPPLSPASLPGPTSQPQKVLLPSSTRITYVQS
AGGHTLPLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQV
GVSPVPSPQLPPACTAPGGPVITAFYPGSPASTSAPLAQPAQAPPSLVYTVATSTTPPAA
TILPKGPPAPATATPAPTSPFPSATGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSF
EAGASGRSGPAPRQPLEPGPTREPTAPESELEGQPTPPAPPPPPETWPPGARSSPPLPLP
AEERPGTKGPETMPSKFSSSSSDWRVPGLGLESREPPTPPSPAPAPAPGSSSGGSLEGSG
GRGAGDTPERKEVAGAGKKVKVRPPPLKKTFDSVDKVLSEVDFEERFAELPEFRPEEVLP
SPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKC
EGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAA
FQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPAGTAATPAPTPS
PAGGPDPTSPGPDSGTAQAAPPLPPPPEPGPGQPGWEGPPQPSPPPSGPSTTATGR
NT seq
7551 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatgaagaaggcatgcactagtctttcaggtcctggtagtggcagcaagtcc
ccaccagccaccagggccaaggccctaaggcggcgaggggctggagagagtgacaagcca
gaggaggaagaggaggagactcagccacagcagcagcctgggccagaagaggctgaagag
ggcgaggaggaggaggccgctgagcggggttctgggtctgaggggcctcccccagaacta
catcccagtgacccagcctcaggcccagccgaggaccccaaaggggatggggaggcaggc
cgctgggagccctcactcagccgcaagacagccacgttcaagtctcgagcccctaagaag
aagtacgtggaggagcacagtgctgctggtgggggggtgacgggggctcctgaagagcag
caagagcggacccctgaggaggccagtgtcctgggggtacccccccagccacctgcttcc
acccgctcctcttccactgacacagccagcgagcactcggccgacctggaggaggagtct
gctgaggcctgtggtccagggccctggcctccgggtggccccagtggtggctatgacctg
cggcagctgcggtcccagcgggtgctggcgcggcgtggtgatggcctcttcctgccggca
gtggtgcgccaggtgcgccgaagccaggacctaggtgtgcagttccctggcgatcgagcc
ttgactttttacgaggggcttccgggcagtggcgtagatgtggttttggatgccacgcca
ccaccaggtgcgctggtggtgggcacagccgtctgtacctgtgtggaacccggggtggca
gcctaccgtgagggtgtggtggtggaagtggccacgaagccagctgcctacaaggtccgc
ctcagccctggccctggctcccaggcaggcccaccaggctccctgccacagccccaaccg
ccgcttcacaaccgggagcccgaagaagccgtgtgggtggcccgctccagcctgcgcctg
ctgcggcccccctgggaacccgaggtcctgctgaggaagccccccattgggcctgaagaa
gagcaagccgagccgggaaccaccctgccgccctgcccagctcccctggaccccaagcag
cctgaggatgctgaggtctccaagattagctttggtggtaccctgggcgtccactgtgag
gagggtgaggagaagcacccaccagccctgggcaccccagccctgctcccactgccccca
ccccagctcctgtccccaccccccaagtccccagcctttgctggccctggtcgccctggg
gagcagccttcgccctgccaggaagggagccagggtggcagccggagcagcagtgtggcc
tcgctggagaagggggccgccccagcagcccgggcccgcaccccactgacggctgcccag
cagaaatacaagaagggcgacgtggtctgcacacccaatggcatccgcaagaagttcaac
ggcaagcaatggcggcggctctgctctcgtgatggctgcatgaaggagtcacagcggcga
ggctactgctcccgccacctgtccatgcgaaccaaggagatggagggcctggcagacggc
gggcctggtggggccgggcggccggctggtgtggcagcccgggagggcagcaccgaattt
gactggggggacgagacatcaagggacagtgaggccagcagtgtggctgcccggggtgac
tcacgcccgcgcctggtggcccccgcggatctgtcacgcttcgagtttgatgagtgtgag
gcagccgtgatgctcgtgtcgctgggcagctcccgttcgggcacgccctccttctccccc
gtctccacgcagtcgcccttctcgcccgccccctcgccctcaccttcgcccctctttggc
ttccgcccggccaacttcagccccatcaacgcctcgcccgtcatccagcgcacagctgtt
cgcagccgccacctgagtgccagcaccccaaaggctggcgtgctgacgccccccgacctg
ggcccccacccgccgccacctgccccccgagaacgtcattcctccggcatccttcccact
ttccagaccaacctaacttttaccgtgcccatcagccctgggcggcgcaagaccgagctg
ctgccccacccagggacattgggggcccctggagcaggaggtgggggtgctgccccagac
ttccctaaaagtgacagcttagactctggtgtggactcagtgtcccacacgcctaccccc
tccacaccggctggcttccgggctgtgtcacctgccgtgcccttctcacgctcccgccag
ccttcaccgttgctgctgctgcccccgcctgccggcctgacctcggatccagggccctcc
gtgcgcagggtgcccgcagtgcagcgggactcgcccgtcatcgttcgcaaccctgatgta
ccactaccctccaagttctctggagaggtgggcacagccggtgaggtccgggctggggga
cctgggcggggctgccgggagactccggtgccccctggggtggccagtggaaagcctggc
ctgcccccacctctgccggctcctgtgcccatcactgtgcctccagccgcgcccaccgct
gtggcccagccgatgcccacctttggcctggcttcgtcacccttccagcctgtggccttc
catccctcacccgctgccctgttgccggtccttgtgccaagcagctataccagccatcct
gcccccaagaaggaagtcatcatgggccggcctggaacagtgtggacaaacgtggaacct
cgctctgtggccgtgttcccctggcactccttagtccctttcctggcacccagccagccg
gacccctctgtgcagcccagtgaggcccaacaacctgccagccacccagtggcctccaac
cagagcaaagaacctgctgagtcagcagctgttgctcatgagcagccaccaggaggcaca
ggaaatgctgaccctgggcggccccctggggccacatgccctgagagcccagggcctgga
cccccacacactttggggatggtggaacctggtaaaggtccccttcctactactgaggag
gagacccctggccccccgggagagccccgtctggacagtgaaacagagagcgaccatgat
gatgccttcctgtccatcatgtctcccgagatccagttgcctctgccacctggaaaacgg
cggacccagtccttgagtgctctgcctaaggaacgagactcatcttctgagaaagacgga
cgcagccccaacaagcgggagaaggaccatatccgtcggcccatgaatgccttcatgatc
ttcagcaagcggcaccgggccctggtccaccagcgtcacccaaaccaggataaccggact
gtcagcaagatcctgggcgagtggtggtatgcccttgggcccaaggagaaacagaagtac
cacgatctagccttccaggtgaaggaggcccacttcaaggcccacccagattggaagtgg
tgcaacaaggaccgaaagaagtccagctcagaggccaagcccgcgagcctggggctggca
ggagggcacaaggagacgcgggagcggagcatgtcggagacgggcactgcggccgcccct
ggggtgtcctctgagctcctgtcagttgcagcccagacactcttgagctcagacagcaag
gctgcagggagtggcccatgtggagcagaacggctgcatgctgttgggggccctggctcg
gcccggccgcgggccttctcccacagtggtgtgcacagcctggatggcggggaggtagac
agccaggcgctgcaagaactcactcagatggtgtctggccccacatcgtactcgggccca
aagcctcccacccagtatggcactccgggccctttcgcagctcctggtgaaggaggcgcc
ttggcggccagtgggcggcccccactgctacccacccgagcctctcgttcccagcgtgca
gccagcgaggacatgaccagtgatgaggaacgcatggtcatctgtgaggaggaaggggac
gatgatgtcattgctgacgatggctttggcaccactgacattgatctcaagtgcaaggag
cgggtgactgacagtgaaagcggcgacagttctggggaggacccagagggcaacaagggc
tttggccgtaagttgttctcacctgtgatccgctcctcttttacccactgccgtcccaca
ctggaccctgagccaccaggtcccccggatccacctgcagcctttgggaaaggctatggt
cccacatcatcctcttcctcctcacctgccaccacctcaacctctgtagccaactctttt
tcactgggctctggaagcttcaaggcccaggagtctggtcagggcagcacaacaggcccc
ctacggccaccaccccctggacctggaggccctgccacaccttccaaggccacacggttt
ctaccatcggaccctgcctccttccggcgcaagagacctgaaagtgtgggcagcctggag
ccatcaggcccctctgtgattgcagtgcctcccagcgggggaggaaccattctgcaaaca
ctggtcctgccccaaaacaaggaggaccgggagggcagcggagcccgtgtgccctcagct
tctgccccatcactgtcttacggggcctcggcagcacctctgtcccgccctgcagccacc
atggtcaccaatgtggttcggcccgtcagcagcactccggtacccatcgcctcgaagccc
ttcccctcctctggccgaaccgaggcatctccaaatgacacagcaggtgccagaactgag
atgagcactggctcccgggtgcccgggggctccccgctgggggtcagcttagtctattcg
gacaagaagtcagcagctgccacctcacctgccccacacttggtggctgggcccctgttg
ggcactgtggggaaagcccctgccactgtcaccaacctgctggtgggcacccctggctat
ggagcccccgcaccccctgctgttcagtttattgcccagggagcgccgggcggtggcccc
actgcaggctcaggagcaggtgctggaagcggccccaatgggccagtacccctgggcatc
ctgcagccaggggccctgggcaaggctgggggaatcacccaggtgcagtatatactgccc
acgctgccccagcagcttcaggtggcacctgccccaggaccaccagctcctggggccaag
gcagcagctcccactggccccgcacccaccaccagcatccgtttcaccctcccacccggc
acctccaccaacggcaaggtcctggctgccactgcacccactcctggcatccccatcctg
cagtctgtaccctccgccccaccccctaaagcccaatcagtttctcccgtgcaggccccg
cccccaggtggctcagcccagctgctgccggggaaggtgctggtgcccctggctgccccc
agcatgtcagtacggggtggggggcctggccagccactgcccctggtgagcccacctttc
tcagtacctgtgcagaatggtgcccagccacccagcaagatcatccagctgacacctgtg
cccgtgagcacacctggcggcctggtgccgcccctgagcccagcctcgcttcctggaccc
acctcccagccccagaaggtcttgctgccttcctctaccaggatcacctacgtgcagtcg
gcaggcgggcacactctgcctctgggtaccagccctgcgtccagccaggctggaaccgtc
acctcatacgggcccacgagctctgtagcactcggcttcacctcactggggcccagcggc
cccgcctttgtgcagcccctgctctcaggccaagcccctctcctggctcctggccaggtg
ggcgtgtcacctgtgcccagtccccagctgcctcctgcctgcacagcccccggaggcccc
gtgataactgcgttttaccctggcagccccgcctccacctcggcacccctggcccagcca
gcccaggccccaccaagcctggtctacaccgtggccaccagcaccaccccacctgctgcc
accattctgcccaaaggcccaccagcccctgccactgccacccccgcccccactagccct
ttccctagtgccacaggctccatgacctacagtttagtggcccccaaggcccagcggccc
agcccgaaggccccccagaaagtgaaggcagccatcgccagcattcccgtgggctccttt
gaagcaggtgcctccgggcggtctggccctgcaccccggcagcctctggagcctggcccc
acccgggagccaactgccccagagtctgagctcgaagggcaacccacaccaccggcccct
ccgccacccccagagacctggcctcccggtgcccggagcagcccccctctccccctccca
gccgaggagcggccaggaaccaagggccccgagaccatgcccagcaaattctccagctca
tcttctgactggcgggtccctgggctgggcctggagagccgggagccccccactcctccc
agcccagccccagccccggccccaggcagtagcagtggtggcagtctggagggcagtggt
ggaaggggggctggagacaccccagagcgcaaggaggtggctggtgctggcaagaaagtg
aaggtgcggcccccgcccctgaagaagaccttcgactcagtggacaaggtcctgtccgaa
gtggactttgaggagcgctttgctgagcttcccgagtttcggccggaggaggtgctgccc
tcccccacgctgcagtctctggccacctctccccgggccatcctgggctcttacagaaag
aagaggaagaactccaccgacctggactcggcgcccgaggaccccacctcacccaagcgc
aagatgaggaggcgctccagttgcagctccgagcccaacaccccaaagagtgccaagtgt
gagggggacatcttcacctttgaccgcacaggtaccgaagctgaggacgtgctgggggag
ctggagtatgagaaggttccctactcatcgctgcgccgcaccctggaccagcgccgcgcc
ctggtcatgcagctcttccaggaccatggcttcttcccatcagctcaggccacggcagcc
ttccaggcccgctatgccgacatcttcccatccaaggtttgtctgcagctgaagatccgt
gaagtgcgccagaagatcatgcaggcagccacccccacagagcagccccctggagctgaa
gcccccctccctggaccacctccagctggcactgctgctacccctgctcccactcccagc
cctgctggcggccctgaccccacctcccctggcccggactctggcactgcccaggctgcc
ccgccactgcctccacccccagagccagggcctggacagcctggctgggaggggcccccc
cagccctctccccctccctctggcccctccacaactgccaccggcaggtga
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integrated database retrieval system
