KEGG   Dipodomys ordii (Ord's kangaroo rat): 105998184
Entry
105998184         CDS       T07834                                 
Symbol
Hdac2
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03082  ATP-dependent chromatin remodeling
dord03083  Polycomb repressive complex
dord04110  Cell cycle
dord04213  Longevity regulating pathway - multiple species
dord04330  Notch signaling pathway
dord04350  TGF-beta signaling pathway
dord04613  Neutrophil extracellular trap formation
dord04919  Thyroid hormone signaling pathway
dord05016  Huntington disease
dord05031  Amphetamine addiction
dord05034  Alcoholism
dord05165  Human papillomavirus infection
dord05169  Epstein-Barr virus infection
dord05200  Pathways in cancer
dord05202  Transcriptional misregulation in cancer
dord05203  Viral carcinogenesis
dord05206  MicroRNAs in cancer
dord05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105998184 (Hdac2)
   03083 Polycomb repressive complex
    105998184 (Hdac2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    105998184 (Hdac2)
   04350 TGF-beta signaling pathway
    105998184 (Hdac2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    105998184 (Hdac2)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    105998184 (Hdac2)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    105998184 (Hdac2)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    105998184 (Hdac2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    105998184 (Hdac2)
   05202 Transcriptional misregulation in cancer
    105998184 (Hdac2)
   05206 MicroRNAs in cancer
    105998184 (Hdac2)
   05203 Viral carcinogenesis
    105998184 (Hdac2)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    105998184 (Hdac2)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    105998184 (Hdac2)
   05165 Human papillomavirus infection
    105998184 (Hdac2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    105998184 (Hdac2)
  09165 Substance dependence
   05031 Amphetamine addiction
    105998184 (Hdac2)
   05034 Alcoholism
    105998184 (Hdac2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dord03036]
    105998184 (Hdac2)
Enzymes [BR:dord01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105998184 (Hdac2)
Chromosome and associated proteins [BR:dord03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105998184 (Hdac2)
   HDAC complexes
    Sin3A-HDAC complex
     105998184 (Hdac2)
    BRAF-HDAC complex
     105998184 (Hdac2)
    REST complex
     105998184 (Hdac2)
    SHIP complex
     105998184 (Hdac2)
    MiDAC complex
     105998184 (Hdac2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     105998184 (Hdac2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105998184 (Hdac2)
  Chromatin remodeling factors
   NuRD complex
    105998184 (Hdac2)
SSDB
Motif
Pfam: Hist_deacetyl DUF2201_N
Other DBs
NCBI-GeneID: 105998184
NCBI-ProteinID: XP_012888293
Ensembl: ENSDORG00000013317
UniProt: A0A1S3GHE0
LinkDB
Position
Unknown
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKEAEDKKADVKEEDKSKEGSGEKTDTKGA
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggaggcggcaagaagaaagtctgctactattacgatggtgatatt
ggaaattattattatggacagggtcatcccatgaaaccacacagaattcggatgactcat
aacttgctgttaaattatggtttatacagaaaaatggaaatatataggccacataaagcc
actgctgaagaaatgacaaagtatcacagtgatgagtatatcaaatttctgcggtcaata
agaccagataatatgtctgagtatagtaagcagatgcagagatttaatgttggagaagat
tgtccagtgtttgatgggctctttgagttttgtcaactctccactggtggttcagttgct
ggggctgtgaagttgaaccgacaacaaactgatatggctgtcaactgggctggaggatta
catcatgccaagaaatcagaagcatcaggattctgttatgtgaatgatattgtgcttgct
atccttgaattactcaagtatcatcaaagggtcttgtatattgatatagatatacaccat
ggtgatggtgttgaagaagcattttatacaacagatcgtgtgatgactgtttccttccac
aagtatggggaatactttcctggcacaggagacttgagggatattggtgctggaaaaggc
aaatattatgctgtcaattttcctatgagagatggtatagatgatgagtcgtatgggcag
atatttaagcctatcatctcaaaagtgatggagatgtatcaacccagtgctgtggtattg
cagtgtggtgcagattcattatctggtgatagacttggttgcttcaacctaacagtcaaa
ggtcatgctaaatgtgtagaagttgtgaaaactttcaacttaccattgttaatgcttggg
ggaggtggatacacaattcgtaacgttgcacgatgctggacatatgagacggcggttgcc
cttgattgtgagattcccaatgagttgccatataatgattactttgagtattttggaccg
gacttcaaactgcatattagtccttcaaacatgacaaaccagaacactccagaatatatg
gaaaagataaaacagcgtttatttgaaaatttgcgcatgttacctcacgcacctggtgtc
caaatgcaagctatcccagaagatgctgttcatgaagacagtggagatgaagatggagaa
gatcctgataagagaatttcaattcgagcatccgacaaacggatagcttgtgatgaagaa
ttctcagattctgaggatgaaggagaaggaggacgtagaaatgtagctgatcataagaaa
ggagcaaagaaagctagaattgaagaagacaagaaagaagcagaagacaaaaaagcagat
gttaaagaagaagataaatccaaggaaggtagtggtgaaaagacagataccaaaggagcc
aagtcagaacaactcagcaacccttga

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