Dipodomys ordii (Ord's kangaroo rat): 105998258
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Entry
105998258 CDS
T07834
Symbol
Ddx56
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dord03009
]
105998258 (Ddx56)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105998258 (Ddx56)
Ribosome biogenesis [BR:
dord03009
]
Eukaryotic type
Pre-60S particles
Helicases
105998258 (Ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
105998258
NCBI-ProteinID:
XP_012888387
UniProt:
A0A1S3GK47
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MADPEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQQLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLAAYCARDVRVANVSA
AEDSASQRAVLMEKPDVVVGTPSRILSHLQQNTLKLRDSLELLVVDEADLLFSFGFEEEL
KSILCHLPRIYQAFLMSATFNEDVQALKELVLHNPVRGAEGESGAIIGMGIVRGLCPSQR
KPVVIGSSNLDLSLLSVLDYTSIQLISLFLQQYLHCALLSXPLCLACRCHIISQFNQGFY
DCVIATDAEVLGAPAKDKRQGRRSKGDKASDPEAGVARGIDFHHVSAVLNFDLPPTPEAY
IHRAGRTARANNPGIVLTFVLPAEQSHLGKIEELLSGEGEAPVLLPYQFRMEEIEGFRYR
CRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHL
SNVPEYLVPAPLRGLIQLRKRRKKLFSSRKAKKAKTQNPLRSFKHKEKKPRPTTVPS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagaagccctgggctttgagcacatgggtctggatcctcggcttctgcag
gctgtcacggatctgggctggtcgcggcctacgctgatccaggaaaaggccatacctttg
gccctggaagggaaggaccttttggcccgagcccgcacgggctccgggaagacagctgct
tacgcgatcccgatgctacagcagctgttgcacaggaaggcgacaggtcctgttgtagaa
caggctgtgagaggccttgttcttgttcctaccaaggagctggcacggcaagcccagtcc
atgattcaacagctggctgcctactgtgctcgggatgtgcgggtggccaatgtctcagct
gcggaagactcagcttctcagagagctgtgctaatggagaagccagatgttgtggtggga
actccatcccgcatattaagccatttgcagcagaacaccttgaaactgagagactccttg
gagctgctggtagtggatgaggctgatcttctcttttcctttggctttgaggaagagctc
aagagtattctctgtcacttaccccggatttatcaggctttcctcatgtcagctactttt
aatgaggatgtacaagcactgaaggagctggttctacacaacccggtaagaggcgctgag
ggagagtctggagctataataggcatggggattgtcagaggactttgtccttctcagagg
aagcctgttgtcattggatcttcaaaccttgatctcagcctcctgagtgtcttggattat
accagtatccagctgatatccttatttcttcagcagtacctccactgtgctctgctgagc
tgacctctctgtttggcctgcagatgccacatcatctcacagttcaaccaaggcttctat
gattgtgtcatagcaacagatgctgaagtcctgggggccccagccaaggacaagcggcag
ggccgacggtccaaaggagacaaggcttctgatccagaggcaggtgtggcacggggtata
gatttccaccatgtgtctgctgtgctcaactttgatcttcctcccacccctgaggcctat
atccatcgagctggcagaacagcacgagccaacaacccaggcatagtattgacctttgtg
ctacctgcagagcagtcccacttaggcaagattgaggagctgcttagtggagagggtgag
gccccggtattgcttccttaccagttccggatggaggagattgagggcttccgctatcgc
tgcagggatgccatgcgctccgtgaccaaacaggccatccgggaggcaagattgaaggag
attaaagaggagcttctgcactctgagaagctcaagacatacttcgaagacaaccccagg
gacctccagctgctgcggcatgacctgcccttgcaccctgcagtggtgaagcctcacctg
agcaatgtcccggagtacctggtccctgcccctctacgtggtctcatacaacttcgcaag
aggcggaagaagctgttctccagtaggaaagctaagaaggcgaagacccaaaatccactg
cgcagctttaagcacaaagaaaagaaacctagacccacaacagtgccctcctga
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