Dipodomys ordii (Ord's kangaroo rat): 105998318
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Entry
105998318 CDS
T07834
Symbol
Vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04140
Autophagy - animal
dord04148
Efferocytosis
dord05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105998318 (Vps41)
04148 Efferocytosis
105998318 (Vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105998318 (Vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105998318 (Vps41)
Membrane trafficking [BR:
dord04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
105998318 (Vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_Prp19
Beta-prop_EML_2
zf_RING_Vps8_fungal
Vps39_1
Beta-prop_HPS5
zf-RING_5
zf_RING_Vps8
zf-C3H2C3
ANAPC4_WD40
TPR_PEP5_VPS11
Frtz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
CofB_pilin_dom
zf-RING_2
RIG-I_C
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
105998318
NCBI-ProteinID:
XP_012888456
Ensembl:
ENSDORG00000015881
UniProt:
A0A1S3GI23
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MAEAEEQDTGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVFLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIVAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMVQQLMSRAVSQFETEFYISGLAPLCDQLVVLSYVKELAEKTEREYCARPR
LDIIQPLSETCEEISSDALTVRGFQENECRDYHLVYSEGESLFYIVSPRDVVVAKERDQD
DHIDWLLEKKKYEEALMAAEISQRNIKRHKILDIGLAYINHLIERGDYDTAARKCQKILG
KNAPLWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLIREW
PGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVFQLI
HKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFK
RDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRM
GNSRSALKMIMEELHNVDKAIEFAKEQDDAELWEDLILYSIDKPPFITGLLNNIGTHVDP
ILLIHRIKEGMEIPSLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGV
LVDEENICESCLSPILPTDAARPFSVVVFHCRHMFHRECLPVPTMNSPTQHCSICSAKNH
GPGGVVLEMKK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgaggaacaggacactggatctcttgaagaatctacagatgagtctgag
gaagaagagagtgaagaagaacctaagctgaagtatgagaggctgtccaatggagtgact
gagattcttcagaaagatgcagctagctgtatgacagtccatgacaagtttttggcactg
ggcacacattatggcaaggtttttttacttgacgtccagggaaatatcactcagaagttt
gatgtgagccccgtgaagataaaccagattagcctggatgagagtggagagcacatgggc
gtgtgttctgaggatggcaaggtgcaggtttttggattatattctggagaagaatttcac
gagacatttgactgtcccattaaaatcgttgctgtgcacccccactttgtgagatccagt
tgcaagcagtttgtgaccggagggaagaagttgctgctgtttgaacgatcttggatgaac
agatggaagtcatcagttctgcatgaaggggaagggaacatccggagtgtgaagtggaga
ggccatctgattgcttgggccaataatatggtgcagcagctgatgtccagggcggtgtct
cagtttgaaacagaattctacattagtgggcttgcacctctctgtgaccagcttgttgta
ctctcctatgtcaaggaacttgcagaaaaaacggaaagagagtactgtgccaggcctaga
ctggacatcattcagccactttctgagacctgtgaggagatctcgtctgatgctctgact
gtcagaggctttcaggagaatgaatgcagggattaccatttagtttactctgaaggagaa
tcactcttctacattgtgagtccaagagacgtcgtagtggccaaagaacgagaccaagat
gatcatatcgactggcttcttgaaaagaagaaatatgaagaagccttgatggcagctgaa
attagccaaaggaacattaaaagacataagattctggatattggtttggcatatataaat
cacttgatagagagaggagactatgacacagcagcacgcaaatgccagaaaattcttggg
aaaaatgcaccactctgggaatatgaagtttataaatttaaagaaattggacagcttaag
gccattagtccttatttgcccagaggagatccggttctgaaaccactcatctatgaaatg
atcttacatgagtttttggaaagtgattatgagggttttgccacactcatcagagaatgg
cctggagatctgtataacaattccgtaatagtccaagcagttcgggatcacctgaagaaa
gacagtcagaacaagacattacttaaaacgctggcagaattgtatacttatgataaaaac
tacggcaatgctctggaaatatacttaacattaagacataaagatgttttccagttgatc
cacaaacataatcttttcagttctatcaaggacaaaattgtcttattaatggactttgat
tcagagaaagctgttgacatgcttttggacaatgaagataaaatttctattaaaaaggta
gtagaagaattagaagacaggccagagttgcaacatgtatatttgcataagctcttcaag
agagaccaccataagggccagcgctaccatgaaaaacagatcagtctttacgctgagtat
gaccgaccaaacttacttccgtttctgcgagatagtactcactgcccactggaaaaggct
ctggagatctgtcaacagaggaactttgtagaagagacggtttatcttctgagccggatg
ggtaacagtcgaagtgccctgaagatgattatggaggaattgcacaacgttgataaagct
attgaatttgccaaggagcaagacgatgcggaactctgggaagatctgattttatattcc
atcgacaaaccaccatttatcactggcttgttaaacaacatcggcacacatgttgacccc
attctcctgattcaccgcattaaggaagggatggagatccccagtctgagagattctttg
gttaaaattctgcaagactacaatttgcaaattctgcttcgtgaaggctgcaagaagatt
cttgtagctgactctttgtcattgttgaagaaaatgcaccgaactcaaatgaaaggcgtc
ctggttgatgaggagaatatctgtgaatcgtgcctgtcccccatccttcccacagatgcg
gcccggcctttcagcgtggtggtcttccactgccgacacatgttccacagggagtgcctg
cctgtgcccaccatgaactctccaacccagcactgcagcatctgcagcgctaagaaccat
gggccaggtggcgtggttttggagatgaagaagtag
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integrated database retrieval system
