Dipodomys ordii (Ord's kangaroo rat): 105998350
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Entry
105998350 CDS
T07834
Symbol
Vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105998350 (Vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105998350 (Vps8)
Membrane trafficking [BR:
dord04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105998350 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
TPR_VPS8_2
zf-RING_Vps41
zf_RING_Vps8_fungal
Beta-prop_WDR36-Utp21_1st
Clathrin
WD40_CDC20-Fz
zf-RING_11
UBA_HOIP
zf-C3H2C3
zf-RING_5
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR5
GED
PHD
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
105998350
NCBI-ProteinID:
XP_012888488
UniProt:
A0A1S3GHY3
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MENEPDYENVEQSLCAKTAEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEEESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGVSAQIVSAADKVDAGLPTAIAQGSLPLQKDQNQALRLCLG
STSVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIK
FTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLHSKPELKDHP
ITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVHNYVNPMLAF
CRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDSVEKLHVIDRQT
QEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYAGQIFYLGTKS
VYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASKRKAVVADRMVE
ILFHYADRALKKCPDQGKIQVMEQHFQDTVPVIVDYCLLLQRKDLLFSQMYDKLSENSVA
KGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMDITSLDIQQIVL
MCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLSDEQVVMGNKLLVYISC
CLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEVYPYVRTLLHFDTREFLNV
LALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFV
NRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEKAEFYQICEF
MYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWKKAMDHIEELVAL
KPCKAADLIATHFSAQIETVIQKLQNQVLLFKFLRSLLDPREGIHANHESLQISPSITEQ
FIELLCQFKPHQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKGDIHGAFLIMLE
RLQSKLQEITHQGESTEEDSSLKDVEGTIVETIALCQRNSHNLNQQQREALWFPLLEAMM
APQKLSSSATPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYGKGKLGEIQGLI
LGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSVCLQQYKRRQEM
ADEIIVFSCGHLYHSFCLQNKECTVEIEGQMRWTCYKCSSSNKVGKLSENSSEVKQGRIT
PSQVRPVS
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagactatgagaatgtggaacagagcctttgtgccaagactgctgaa
gaagaactgaataagtctttcaatctagaagcttcactttcaaaattctcttacatagat
ttggacaaggaactggaattcaaaaatgatttgattgatgacaaggagtttgatattcct
caagttgatactcctccaactctggaaagcatactaaatgagactgatgatgaagaagaa
tcttttgttcttgaggatcctacactgctaaacattgatactattgattctcactcctat
gatacttcatctgtggcaagttcagatagcggtgacaggaccaatttaaaaaggaagaaa
aaattacctgattctttttcactccatggatcagttatgcgacattcacttctaaaggga
gtttctgcccagatagtgtctgcagctgacaaagtagatgctggcttgcctacagcaatt
gcacaaggttccttacccctgcaaaaagatcagaatcaagcattgcggctctgcttgggt
agcactagtgttggagctcagtatggtgccatctctgcccttagcatcaacaatgactgc
tccagacttctttgtgggtttgctaaaggccagatcaccatgtgggatttggccagtgga
aaacttctcagatcaataacagatgctcatcctccaggaacagcaatattgcatatcaag
ttcacagatgatccaactcttgcgatttgcaacgacagcggaggttctgtttttgaattg
acatttaagagagtgatgggagtgaggacctgtgaatctagatgtctcttcagtggctct
aagggtgaagtgtgctgcattgaacctctacattccaagcctgaattgaaagatcatccc
atcacacagttttcattattggccatggcatccttaacaaagatactggtcattggattg
aaaccatccttgaaagtgtggatgacttttccctatggacggatggatccctccagtgtt
ccattgctggcctggcactttgtggcagtgcataattatgtgaaccccatgcttgcattc
tgcagaggtgatgttgttcattttctgttggttaagagagatgaatctggagcaatacat
gttactaagcaaaagcaccttcacctgtattatgaccttatcaactttacttggataaac
tctcgcacagttgtgctcctagacagtgtggagaagctgcatgtgatcgatcggcagaca
caggaggaactagaaacagtggagatctcagaggttcagttggtctataatagcagccac
tttaagtcacttgccaccggaggaaatgttagccaggccctggctttggttggagagaag
gcttgttaccaatccatcagtagctatgctggtcagatcttttatttggggacaaaatct
gtttatgtgatgatgctgaggagttggagagagagagtggatcatctcctgaaacaagat
tgtcttacagaagccttggctctggcatggtcttttcatgaaggaaaagccaaagcagtg
gtggggctatcaggggatgccagtaaacgaaaggctgttgttgctgatcggatggtcgaa
atcctattccattatgcagatagagctctgaaaaagtgcccagaccaaggaaagattcaa
gtaatggagcagcatttccaggatacagtgcctgtcatcgtggattactgcctgctgctg
cagcgaaaggatcttttatttagccaaatgtatgacaaattaagtgagaattcagtggcc
aaaggagtgtttttggagtgccttgaaccatatattttaagtgataaattggtggggatc
acaccccaggtcatgaaagacttaattgttcatttccaagataaaaagttaatggaaaat
gtggaagccctcattgtacatatggatattaccagcctagacattcagcagatagttctc
atgtgctgggaaaatcgtctctatgatgctatgatctatgtctacaacagaggcatgaat
gaatttattagtcccatggagaaacttttcagagtcattgctcctcctctgaatgcagga
aaaacgctatcagatgagcaagttgtcatgggcaataagcttcttgtatatattagctgc
tgtctggcaggtcgtgcatatccccttggtgacatccctgaagatcttgtccccttggtt
aaaaaccaggtttttgaatttttgattcgcctgcattcagcagaagcatctcctgaggaa
gaagtctatccttatgtccggactttgctacattttgacacaagggaatttctgaatgta
ttggcactgacctttgaagattttaaaaatgacaagcaagctgtggaataccagcagcga
attgtggatattttgttgaaagttatggtggagaattcagatttcactccctcacaagta
ggatgtctctttactttcctggcacggcagcttgcaaagcctgacaataccttgtttgtg
aacagaaccctctttgatcaggttcttgaattcctctgtagtcctgatgatgactccagg
cactctgagagacagcaggtccttttagaattgctgcaggctggaggcatagttcaattt
gaagagagccgactcatccgcatggcagaaaaagctgagttctatcaaatttgtgaattt
atgtatgaacgtgaacaccaatatgacaaaattattgattgctacttgcgtgacccattg
agagaggaagaagtctttaattacattcacaacatcttgtccattcctggccacagcgct
gaggagaagcagtctgtgtggaagaaagcaatggatcatattgaggaacttgtggctctg
aagccctgtaaggctgcagatttgattgcgacccacttttctgcacagattgaaaccgtc
attcaaaaacttcagaaccaagttttacttttcaaatttttgaggagtcttcttgatcca
agggaaggtattcatgcaaatcatgagtcactacaaatatctcccagtattacagagcag
ttcattgaactattgtgtcagtttaagccacaccaagttatagagacactgcaagtcctt
gagtgctaccggctggaagaaactattcagattactcagaagtatcagctccatgaagtc
actgcttatctattggaaaagaaaggagatattcatggtgctttcttgataatgctagag
agactacaaagcaaacttcaagagataacacatcaaggtgaaagtactgaagaagattcc
tcactgaaggatgttgaaggtaccattgtagagacgattgcactttgccaaagaaattcc
cataatttgaaccagcagcaacgagaggcactctggtttccattattggaagcaatgatg
gccccacagaagctgtccagctcagccacccctcatctccactccgaagctctgaaatct
ttgaccatgcaagttctcaatagcatggcagcatttattgctcttccatcaatcttgcaa
agaatcttacaggacccagtttatggaaaaggaaaacttggagaaatccagggacttatt
ctgggaatgttagacacctttaactatgaacaaactctactagaaacaacaaccagcctt
ctaaaccaagatctccactggtcattgtgtaacctgagagcttcggtcacaagagggctg
aatcctaaacaggattattgctcagtatgtctgcagcagtacaagagacgccaagaaatg
gctgatgaaattattgtctttagctgtggccacttgtatcattcattctgtctacaaaac
aaagaatgcaccgtagaaatcgaggggcaaatgagatggacatgctacaaatgcagctca
agtaacaaagtcggaaaactaagtgaaaattcatctgaagttaaacaaggaaggataacc
ccatcacaggtaagacctgtttct
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integrated database retrieval system
