Dipodomys ordii (Ord's kangaroo rat): 105998406
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Entry
105998406 CDS
T07834
Symbol
Chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dord03036
]
105998406 (Chd5)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105998406 (Chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
105998406
NCBI-ProteinID:
XP_012888561
Ensembl:
ENSDORG00000005923
UniProt:
A0A1S3GID8
LinkDB
All DBs
Position
Unknown
AA seq
1914 aa
AA seq
DB search
MEAVSLPKKKKPRKLKESKSKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKRKK
KLKEKKERKAKRKKKDEDEDDNDDGCLKEPKSSGQLMAEWGLDNVDYLFSEEDYHTLTNY
KAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVT
IAPPLAISPQQVPQPMPIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKVAGLKFRFGGI
SNKRKKGSSSEEDEREESDLDSASIHSSSVRSECSAALGKKSKRRRKKKRIDDGDGYETD
HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDE
EEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT
CPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVESEMPPPKPLEGIPEREFFVKWAGLSYW
HCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEER
FYRYGIKPEWMMIHRILNHSFDKKGEVHYLIKWKDLSYDQCTWEIDDIDIPYYDNLKQAY
WGHRELMLGEDARLPKRLLKKGKKLKDEKQEKPPPDTPIVDPTVKFDKQPWYMDSTGGTL
HPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLST
IINWEREFEMWAPEFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFH
VLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQ
NNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNM
PAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFP
VAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL
EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDS
DWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSK
SGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGS
TPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATEDTELQNMNEYLSSFKVAQYVVREEDG
VEEVEREVIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQE
WQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIE
VLGFNARQRKAFLNAIMRWGMPPQDAFNSQWLVRDLRGKSEKEFRAYVSLFMRHLCEPGA
DGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPESKKLP
GEVISDPNTPVPASPAHLPPAPLGLPDKMEAQLGYLDEKEQGLQKPEKALDPQALPAALD
RAEVEDKHESSDSKDRGREERPEEAEKAQPSPEQLLKDDAPSEKEKVLDKLELSLSHSRG
DGSDFRPDDPKAEEKETSETQQNGDREEDEEGKKEDKSGKFKFMFNIADGGFTELHTLWQ
NEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEVHKGN
YLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQ
HLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSIL
SRLTNRAGDPTIQQGAFGSSQMYNNSFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgagccttcccaagaagaagaaacccaggaagctcaaggagagcaagtcc
aaggggaagcggaagaagaaagaggggagcaatgatgagctatcagaaaatgaggaggat
ctggaagagaagtcagagagtgaaggtagtgactactccccgaacaagaagaggaagaag
aaactgaaggagaagaaggagagaaaagccaaacgcaagaagaaggatgaagatgaggat
gataatgatgatggatgcttaaaggagcccaagtcctcagggcagctcatggcagagtgg
ggcctggacaacgtagactacctgttctctgaggaggactaccacacgctgaccaactac
aaggccttcagccagttcctccggccactcatagccaagaagaacccaaagatccctatg
tccaaaatgatgactgtcctgggtgccaaatggcgggaattcagtgccaacaaccctttt
aagggtagttctgcggcggcggctgcggcggcggtggctgcagctgtggagacggtcacc
attgcccctcctctggccatcagcccccagcaggtgccccagcccatgcccatccgcaag
gccaagaccaaagagggcaagggccctggagtaaggaagaagatcaaaggctccaaagat
gggaagaagaaggggaaggggaaaaaagtggctgggctcaagttccgctttggagggatc
agcaacaagaggaagaaaggctcctcgagtgaggaggatgagcgggaggagtccgatttg
gacagtgccagcatccacagctcgtcagtgcgctctgagtgttctgcagccctgggcaag
aagagcaagagaaggcgcaagaagaagaggattgatgatggtgatggctacgagacggac
caccaagattactgtgaggtgtgccagcagggaggggagatcatcctgtgtgacacctgc
ccaagggcctaccacctggtctgccttgatccagagctggagaaggctccggagggcaag
tggagctgccctcactgtgagaaggaggggatccagtgggagccaaaggacgacgatgag
gaggaggaggagggcggctgtgaggaggaggaagatgaccacatggagttctgccgagtc
tgcaaggatggcggtgagctgctctgctgcgacgcctgcccctcctcctaccacctgcac
tgcctcaacccgccgctgccggagatcccaaatggtgaatggctctgcccgcgctgtact
tgtcccccactgaagggcaaagtccagcggatcctccactggcggtggacagagccccca
gcccctttcatggtggggctaccaggaccagatgtggagtcggagatgcccccacccaaa
cccctggagggtatcccagagagagagttctttgtcaagtgggccggactctcctactgg
cactgctcctgggtgaaggagctgcagctggagctctaccacacggtgatgtatcgcaac
taccaaagaaagaacgacatggatgagccgccgcccttcgactatggctctggcgatgag
gacggcaagagtgagaagaggaagaacaaggacccactgtatgccaagatggaggagcgc
ttctatcgctacggcatcaagccggagtggatgatgatccaccgcatcctgaaccacagc
ttcgacaagaagggggaagtccactacctcatcaagtggaaggacctgtcctatgaccag
tgcacctgggagattgatgacatcgatatcccctattatgacaacctgaagcaggcctac
tggggtcacagggagctgatgctgggagaggatgccaggctgcctaagcggctgctcaag
aagggcaagaagttgaaggatgagaaacaggagaagccaccgccagatacacccattgtg
gaccccacggtgaagttcgacaagcagccatggtacatggactccactggcggcacgctg
cacccgtaccagctggagggcctcaactggctgcgcttctcctgggcccagggcaccgac
accatcctggcggacgagatgggtctgggcaagactgtgcagaccatcgtgttcctgtac
tcgctgtataaggagggccactccaaggggccctacctggtcagtgcgcccctgtccacc
atcatcaactgggaacgggagtttgagatgtgggcgcctgagttctacgtggtcacctac
acgggagacaaggagagccgctcggtgatccgagagaatgagttctcctttgaggacaac
gccattcgcagtgggaagaaggtgttccggatgaagaaagaagtacagatcaaattccac
gtcctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggctccattgag
tgggcctgcctggtggtggacgaggcccaccgactcaagaataaccaatctaaattcttc
agggtcttgaacagctacaagattgattacaagctgctcctcactgggactccgcttcag
aacaacctggaggaactcttccatctcctcaacttcctgactccagagaggttcaacaat
ctggagggcttcctggaggagtttgccgacatctccaaggaagaccagatcaagaagctg
catgacctgctggggccacacatgctgcggcggctcaaggccgacgtgttcaagaacatg
ccggccaagacggagctgatcgtccgcgtagagctgagccagatgcagaagaagtactac
aagttcatcctcacgcggaacttcgaggcgctgaactccaaggggggcgggaaccaggtg
tcgctgctcaacatcatgatggacctcaagaagtgctgcaaccacccctatctgttcccc
gtggctgccgtggaggcccctgtcctgcccaatggctcctacgatggcagctctctggtc
aagtcttcagggaagctcatgctcctgcagaagatgctcaagaagctgcgggacgaaggg
caccgggtgctgatcttctcccagatgaccaagatgttggatcttctggaggacttcctg
gagtatgagggctacaagtacgagcgcatcgatggcggcatcacgggcggtctgcggcag
gaggccatcgacagattcaatgcccctggagcccagcagttctgcttcctgctttcaacc
cgcgcaggtggcctgggcatcaacctggccacagcggacacggtcatcatctatgactcg
gactggaacccccacaacgacatccaggccttcagccgtgcccaccgcattgggcagaac
aagaaggtgatgatctaccgctttgtgactcgggcctccgtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacacacctggtggtacggccgggcctgggctccaag
tcgggctccatgaccaagcaggagctggacgacattctcaaattcggcacggaggagctc
ttcaaggacgacgtggagggcatgatgtcccagggccagaggcctgtcacgcccatccct
gacgtgcagtcctccaagggcggagctctggctgccagcgcaaagaaaaagcacgggagc
accccaccaggtgacaacaaggacgtggaggacagcagcgtgatccactatgacgatgcg
gccatctccaagctgctggaccggaaccaagatgccacggaagacacggagctgcagaac
atgaacgagtacttgagctccttcaaggtggcgcagtatgtggttcgggaggaagacggc
gtggaggaggtggagcgggaggtgatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctgcgacaccactacgagcagcagcaggaggacctggcgcgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcgcaggaggaccaggag
tggcaggacgagctttcagataaccagtccgaatattccatcggctctgaggatgaggat
gaggacttcgaggagaggccggaagggcagagcgggcggcgacaatccagaaggcagctg
aagagcgaccgagacaagcccctgccacctctgctggctcgagtgggtggcaacatcgag
gtgctgggcttcaacgcccgccagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccccaggacgccttcaactcccagtggctggtgcgcgacctccgtgggaagagt
gagaaagaatttcgagcctacgtgtccctcttcatgcggcacctgtgtgagccgggggcc
gacggtgccgagacctttgcggacggcgtgccccgggagggcctgtccagacagcacgtg
ctcacccgcatcggggtcatgtcactggttaggaagaaggttcaggagtttgagcacgtc
aatgggaagtacagcaccccagacctgattcccgaggggccggagagcaagaagctgcct
ggggaggtcatctcggaccccaacacgccggtgccggctagccctgcccacctcccgcca
gccccactgggtctgccagacaaaatggaagcccagttgggctacctggatgagaaggag
caagggctgcagaagccagagaaggccctggacccccaggccctgcccgcagccctggac
agagcagaggtggaggacaagcatgagagctcggacagcaaggaccgaggccgagaggag
cggccggaggaggcagagaaggcccagccctccccggagcagctgctgaaagacgacgcg
ccttctgagaaggagaaagttctggacaagctggagctgagcctgagccacagcagaggg
gatggcagtgatttcaggccagatgaccccaaggccgaggagaaggagacctcggaaaca
cagcaaaatggtgacagagaggaggatgaggaggggaagaaggaagataagagtgggaag
ttcaaattcatgttcaatatcgcagacggaggcttcacagagctgcacacactatggcag
aacgaggagcgggctgccgtgtcctcgggaaaaatctatgacatctggcaccggcgccat
gactactggctgctggcgggcatcgtgacgcacggctatgcccgctggcaggacatccag
aatgacccgaggtacatgatcctcaatgagcccttcaagtccgaggtccataagggaaac
tacttggagatgaagaacaagttcctcgcccgcaggttcaagctgctggagcaggcgctg
gtcattgaggagcaactgcggagggctgcgtacctcaacatgacccaggaccccaaccac
cccgccatggccctcaatgcccgcctggctgaggtggagtgccttgctgagagtcaccag
cacctgtccaaggagtccctggctgggaacaagcctgccaacgccgtcctgcacaaggtc
ttgaaccagctggaggagctgctgagtgacatgaaggcggacgtgacacggctgccttcc
atgctgtctcggatccccccggtggccgctcgcctgcagatgtctgagcgtagtatcctt
agccgcctgaccaaccgtgccggtgaccccaccattcagcagggcgctttcggctcctcc
cagatgtacaacaacagctttgggcccaacttccggggccctggaccgggagggattgtc
aactacaaccagatgcccctggggccctatgtgactgatatctag
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integrated database retrieval system
