KEGG   Dipodomys ordii (Ord's kangaroo rat): 105998500
Entry
105998500         CDS       T07834                                 
Symbol
Rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03030  DNA replication
dord03410  Base excision repair
dord03420  Nucleotide excision repair
dord03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105998500 (Rfc2)
   03410 Base excision repair
    105998500 (Rfc2)
   03420 Nucleotide excision repair
    105998500 (Rfc2)
   03430 Mismatch repair
    105998500 (Rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dord03032]
    105998500 (Rfc2)
   03036 Chromosome and associated proteins [BR:dord03036]
    105998500 (Rfc2)
   03400 DNA repair and recombination proteins [BR:dord03400]
    105998500 (Rfc2)
DNA replication proteins [BR:dord03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105998500 (Rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    105998500 (Rfc2)
Chromosome and associated proteins [BR:dord03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105998500 (Rfc2)
DNA repair and recombination proteins [BR:dord03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105998500 (Rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    105998500 (Rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 nSTAND_NTPase5 AAA_lid_RFC1 AAA_14 AAA_16 Viral_helicase1 Mg_chelatase AAA_11 RCF1-5-like_lid RuvB_N AAA_19 AAA_assoc_2 nSTAND3 AAA_24 MipZ AAA_5 AAA_18 DNAX_ATPase_lid AAA_28 ABC_tran AAA_25 Rad17 AAA_30 AAA_23 NTPase_1 SLFN-g3_helicase MeaB RNA_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 105998500
NCBI-ProteinID: XP_012888681
UniProt: A0A1S3GIR0
LinkDB
Position
Unknown
AA seq 323 aa
MPFPPHRVEKYRPVKLSEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR
ALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQ
QALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLARLLSVLEKEGV
PHTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCV
DANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFPMAEYLKLEFIKEIGYTHMKVAEGV
NSLLQMAGLLARLCQKTMAPVAS
NT seq 972 nt   +upstreamnt  +downstreamnt
atgccttttccgccacacagggttgaaaaataccggccagtgaagttgagcgagatcgtg
gggaatgaggacacggtcagcaggctggaggtcttcgcacgcgaggggaatgtgcccaat
atcatcatcgccggcccccccgggactggcaagaccaccagcatcctgtgcctggcccga
gcgctgctgggcccagccctgaaggacgccgtgctggagctcaatgcctccaacgacagg
ggcatcgatgtggtgaggaataaaattaaaatgttcgcccagcagaaggtcaccctcccc
aagggacgccacaagatcatcatcctggatgaggctgacagcatgacagatggggcccag
caggctttgcgcaggaccatggagatctactctaagaccacccgcttcgccctggcctgc
aacgcctccgacaaaatcatcgagcccatccagtcccggtgtgcggtgctgcgctacact
aagctcactgacgcccaggtgctggcgcggctcctgagcgtcctggagaaggaaggggtg
ccgcacaccgacgacggcctggaggccatcatcttcacggcccaaggggacatgcggcag
gcgctgaacaacttgcagtccaccttctccgggtttggctttatcaacagcgagaatgta
ttcaaggtctgtgatgagccccacccgctgctggtgaaggagatgatccagcactgcgtg
gatgccaacattgatgaggcatacaagatcctggcacacctgtggcacctgggctactcc
cctgaggacatcattggcaacatcttccgagtgtgtaaaactttccccatggccgagtac
ctgaagttggagttcatcaaggaaatcgggtacacacacatgaaagtggcagaaggtgtg
aactccctcctgcagatggctgggctcctggcaaggctgtgtcagaagacaatggctcca
gtggccagttag

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