Dipodomys ordii (Ord's kangaroo rat): 105998804
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Entry
105998804 CDS
T07834
Symbol
Rims1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04721
Synaptic vesicle cycle
dord04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
105998804 (Rims1)
04721 Synaptic vesicle cycle
105998804 (Rims1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105998804 (Rims1)
Membrane trafficking [BR:
dord04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
105998804 (Rims1)
Small GTPases and associated proteins
Rab associated proteins
105998804 (Rims1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
105998804
NCBI-ProteinID:
XP_012889069
UniProt:
A0A1S3GLF5
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGA
TNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVI
SPTSPGALKDAPQVLPGQLSVKLWYDRVGHQLIVNVLQATDLPPRADGRPRNPYVKMYFL
PDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITLWDQPRAQEEESQFLG
EILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFLPRRHLHGESSSKKLQRSQRISDS
DISDYEIDDGIGVVPPVGYRSSAREIKATTLTVPEQQRTTHHRSRSVSPHRGDDQGRPRS
RLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPIDHRARDMDSQYLSEQDSELLMLPRAK
RGRSAECLHTTRHLVKHYKSLPPKMPLLQNGSHWNVYSSILPAHAKTKSVTRQDIPFHHE
YFNSRKLRFTDEILVSELQPSLDRARSASTNCLRPDTSLHSPERERGRWSPSLDRRRPPS
PRIQIQHASPENDRHSRKSERSSIPKQTRKGTGSDAERVLPPCLSRRGYAAPRATGQAVI
RGKHPARSRSSEHSSVRTMCSMHHLPPGGSAPPSPLLTRMQRQGSSSQSPPTDSGLGSRR
GRQLPQVPVRSGSIEQASLVVEERTRQMKMKVHRFKQTTGSGSSQELDHEQYSKYNIHKD
QYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISSFTPKMQGRR
MGTSGRAITKSTSVSGEMYTLEHNDGSQSDTAVGTVGAGGKKRRSSLSAKVVAIVSRRSR
STSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPG
VRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKP
GSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDY
GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGP
PCIRS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaatcaggtgcattactgggacttaaagttgttggaggaaaaatgactgac
ttaggacgcctgggtgctttcatcaccaaagtgaagaagggtagccttgcagatgttgtt
ggccatctaagagcaggggatgaagttctagaatggaatggtaaacccctgcctggagct
acaaatgaagaagtttacaacattattttagaatcaaaatcagaacctcaagttgaaatt
attgtttcaaggcctattggtgacattcccagaattcctgagagctctcatcctccactg
gagtccagttcaagttcctttgaatctcagaagatggaaaggccttctatttctgtgatt
tctccaacaagtcctggagctctaaaagatgccccacaagtgttaccagggcaactctct
gtgaagctgtggtatgacagagtggggcaccagctgatcgtgaatgttctacaagcaaca
gatctaccccctagagcagatggccggcctagaaatccctatgtaaaaatgtattttctt
ccagatagaagtgacaaaagtaaaaggaggaccaaaacagtaaagaaagttctagaaccc
aaatggaaccaaacttttgtctattcccatgtacatcgtcgcgattttcgagagcggatg
ttagaaataactctgtgggatcagcctagggcacaagaagaagaaagccaatttcttgga
gagatccttatagaattggagacagcacttttagatgatgagccacactggtataaactt
cagacccatgatgagtcttcactacctctgccccagccgtcaccctttctgcccaggcga
catcttcatggagaaagctctagcaaaaagctccaacgatctcagcgaatcagtgatagt
gacatctcagattatgagattgatgatggtattggagtagttcctccagtgggttatagg
tctagtgctagagaaattaaagcaaccacattaacagtgccggaacagcaaagaaccact
caccaccgctcacgctcagtatctcctcatcgcggcgatgatcagggaaggccgcgttca
cgtttaccaaatgtgccattacagaggagcttagatgaaattcatccaaccagaagatca
cgctctccaaccagacaccatgatgcctcccgaagtcccattgaccatagagccagagat
atggacagtcaatatttatctgaacaagacagtgagcttcttatgctgcccagagcaaaa
cgaggacgaagtgcagaatgcctacatactaccagacatcttgttaaacactataaatca
ttaccacccaagatgcctttattacagaacggctctcactggaatgtctacagctcaatt
ctgcctgcacatgctaagaccaaatcagtgactagacaggacattccctttcatcatgaa
tactttaactcaagaaaattgagatttactgatgaaatactggttagtgaactacagccc
tcgcttgacagggctaggagtgctagtactaactgcttgagaccagatactagtttgcat
tcaccagaacgagaaaggggtagatggtccccctccctagataggagacgacctcctagc
cccaggattcaaatccagcacgcatctccggagaatgacaggcactccagaaagtctgaa
agatctagcatcccaaaacagactaggaaaggcactggctctgatgcggaaagggttctc
ccaccatgtctttctagaaggggatacgcagccccaagagcaactggtcaagcagtcatt
aggggaaaacatcccgctcgctccagatcgagtgagcactctagtgtcagaactatgtgt
tctatgcaccaccttccccccggaggctcggcgccaccttctccacttctgacaagaatg
caaagacaaggaagttccagccaatctcccccaacagacagcggcctgggcagccggagg
ggaagacagcttccacaggtgccggtgaggagcggcagtatagaacaagcaagcttagta
gtggaagagcgaacgagacagatgaaaatgaaagtgcatcgatttaagcagacaacaggg
tctggttctagtcaagaacttgatcacgagcaatattccaagtataacatacataaagat
cagtacagaagctgtgataacgtctctgccaagtcatcagatagcgatgtcagtgatgtg
tccgccatttctcgaaccagcagtgcctcacgcctcagcagcacaagctttatgtcagag
caatctgagcgccccaggggaaggatcagttcatttacccccaaaatgcaaggcagacgg
atggggacatcaggaagagccatcacgaagagcaccagtgtgagtggagagatgtacaca
ctggagcacaatgatggcagccagtcagacacagctgtgggtacggttggagcaggtggg
aagaaacggagatccagcctgagtgccaaagtggtggccattgtttctcgaagaagtcga
agcacatcccaacttagccaaacagagtcaggacacaagaagttaaaaagcaccattcag
agaagcacagaaacgggcatggcagcggaaatgaggaagatggtgagacagccaagccgg
gagtctactgatggcagcatcaacagctacagctcagagggaaacttaatatttcctgga
gtgcgactgggtgctgacagccagttcagcgattttcttgatggactgggtcccgcccag
ctggttggacgccaaaccctcgccacccctgcgatgggtgatatacaaattggaatggaa
gataaaaagggccagttagaagtagaagttattagagcacgaagcctcacacaaaaacct
ggttccaaatctacacctgctccttatgtcaaagtctatcttttggaaaatggagcctgt
atagccaaaaagaagacaagaattgcacggaaaactcttgatcctttgtatcaacagtcc
ttggtttttgatgaaagtccacagggaaaagttcttcaggtgatcgtgtggggagactat
ggcagaatggaccacaaatgctttatgggtgtggctcaaatcttactggaagaactggat
ctgtccagcatggtgattggatggtacaaattgttcccgccctcatcactggtggatccc
acactcactcccctgacccgtcgggcttcccaatcttctctggaaagttcaactgggcct
ccctgcatccgatcatag
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