Dipodomys ordii (Ord's kangaroo rat): 105998848 Help Entry 105998848         CDS       T07834                                  Symbol Atg4b Name (RefSeq) cysteine protease ATG4B   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism dord  Dipodomys ordii (Ord's kangaroo rat) Pathway dord04136   Autophagy - other dord04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:dord00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     105998848 (Atg4b)    04136 Autophagy - other     105998848 (Atg4b)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:dord01002]     105998848 (Atg4b)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dord04131]     105998848 (Atg4b)    03029 Mitochondrial biogenesis [BR:dord03029]     105998848 (Atg4b) Peptidases and inhibitors [BR:dord01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    105998848 (Atg4b) Membrane trafficking [BR:dord04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     105998848 (Atg4b) Mitochondrial biogenesis [BR:dord03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     105998848 (Atg4b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  105998848 NCBI-ProteinID:  XP_012889123 UniProt:  A0A1S3GJS3 LinkDB All DBs Position Unknown AA seq 319 aa AA seqDB search MLRCGQMIFAQALVCRHLGRDWRWAQRQRQPDSYFSVLSAFLDRKDSYYSIHQIAQMGVG EGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAGLPSAGAAA LPADSERHCNGFPAEAEAAPRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLG VIGGKPNSAHYFIGYMGEELIYLDPHTTQPAVEPSDGCCIPDESFHCQLPPCRMGIGELD PSIAVGFFCQTEEDFSDWCQQVKKLSLLGGALPMFELVEQQPSHLACPDVLNLSLDSSDV ERLERFFDSEDEDFEILSL NT seq 960 nt NT seq  +upstreamnt  +downstreamnt atgctgcggtgcggacagatgatctttgcccaggctcttgtgtgccgacacttaggccga gattggaggtgggcgcagcgccagcggcagcctgacagctacttcagcgtcctcagcgcc ttcctggacaggaaggacagctactactccatccaccagatagctcaaatgggagttggt gaagggaagtctataggccagtggtatgggccgaacaccgtcgctcaggtcctcaagaag cttgctgtgttcgacacgtggagctccttggcggttcacatagcaatggacaacactgta gtgatggaggagatcagaagattgtgcagggctggtcttcccagtgccggggctgctgca ctccctgcggattccgagcggcactgtaacggctttcctgcggaggccgaggccgctccc cggccgtcgccctggagaccactcgtgctgctgatccccctgcgcctgggcctcacagac atcaacgaggcctacgtggagacgctgaagcactgtttcatgatgccccagtccctgggt gtcatcggagggaagcccaacagtgcccactacttcattggctacatgggtgaggagctg atctacctggacccccacacgacgcagcctgcggtggagccgagcgacggctgctgcatc ccagacgagagcttccactgccagctccctccctgcaggatgggcatcggggagctcgac ccttccattgccgtggggtttttctgccagaccgaggaggacttcagcgactggtgccag caagtcaagaagctgtcactgctcggaggtgccctgcccatgtttgagctggtggagcag cagccttcccacctggcctgtccagacgtcctcaacctgtccctcgattcttctgatgta gaacgactggaaagattctttgactcagaggatgaagactttgagatcttgtcgctctga

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