Dipodomys ordii (Ord's kangaroo rat): 105998917
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Entry
105998917 CDS
T07834
Symbol
Ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105998917 (Ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dord03036
]
105998917 (Ercc6)
03400 DNA repair and recombination proteins [BR:
dord03400
]
105998917 (Ercc6)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105998917 (Ercc6)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
105998917 (Ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
105998917
NCBI-ProteinID:
XP_012889227
Ensembl:
ENSDORG00000002059
UniProt:
A0A1S3GML7
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MPYEEIPHSSQAQEQDGFQSYHVNASKETSTEPENGGNGEAEKCLPSPSSDYGVSTPAEA
CASVAGRRGPGLLHIDRHQIPAVEPSAQALELQGLAVDVYDQSVLEQGVLQQVDSAMHEA
SRATQLADAEKEYRSVLDDFMSCMKSLRQIDKIIEQLSPQALTSRDISRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILRGAEVQVELEHASLEEDAEPGPSCLGSMLMPAQETAWDELI
RTGQMTPFGTQVPQKQEKKPRKIMLNEASGFEKYLADQAKLSFERKKQATNKKVARKAPV
LCESNTGPNENRPSQGSKVVSRADQRLKKHMRKLQRRALQFQGKVQLPKGKKSLEPQGGP
ETEVDSEGEEFGSFPTEEMEEEEEEEEEDRTGAELSEDGTDYELKPLHRGRKRQKKVLAQ
EVDDDFFPSSGEEAEATGEEGGRGGGRKEARCRDDGDEDYYKQRLRRWNKLRLQDKVKCL
KLDDDSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTI
QIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHET
GSYTHKKEKLVRDIAHCHGILITSYSYIRLMQDAISRYDWHYVILDEGHKIRNPNAAVTL
ACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNAS
PVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHEVYQNFI
DSKEVYGILNGDMQIFSGLVALRKICNHPDLFSGGPKNLKGHPDEELEENQFGYWKRSGK
MIVVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRARNYSYLKMDGSTTIASRQPLIAK
YNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVY
RLLMAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDVSQSTETSA
IFAGIGSDVKTPSRCLKRKATPAFRTDHTIPKCTKFPDSNISAKGATLTEEEPKAAGVVT
CNESGLLKGALHLGGSSSAGDSGEAGMESGPKGLPVASASGDCSDSVRVGRTPGPSGGGS
TSEKEGPSCEGESCPLKTEPLWENGRVESHFHKHKSKTKHQDMAGEETPGKPMKAKCRRD
AKFEGTRIPHLVRKKRYHKQDSEQESQATEQNSDDYVLQKLFKKSVGVHSVVKHDAIVDG
TSPDYVLVEAEASRVAQEALKALKLSRQRCLGAASGVPTWTGHRGTSGAPAGIKSRFGQK
RNSKLTVQSPSSASPTQKCQDSTLKKEGKDGALEHFSGKAEEAESSSRALASSLLLARMR
ARNHLILPERLESDSGLLPETSAPLPTATEHDDLLVEMRNFIAFQAHVDGQASTQEILQE
FESKLSTSQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgccttatgaggaaatccctcactcaagtcaagctcaggagcaagatggctttcaaagt
taccatgtcaatgctagtaaagaaacatcaactgagccagaaaatggtgggaatggggag
gcagagaagtgccttccctctccttcctctgactatggtgtgtccaccccagctgaggcc
tgtgcatcagtggctgggaggagagggcctggcctgttgcatatcgacaggcatcagatt
ccagcagtggagcctagtgcgcaggccctggagctgcagggcctggcagtggatgtctat
gaccagtctgtgttagagcagggtgtgcttcagcaggtggacagtgcaatgcatgaggcc
agtcgtgccacccagcttgctgatgctgaaaaggagtaccggtcggtcctagatgacttc
atgtcatgtatgaagtccttaaggcagatcgataaaattattgaacagcttagccctcag
gctctcaccagcagagacatcagcaggaaactagattctgtaaaacggcagaagtataat
aaggaacagcagctgaagaagataactgcaaagcagaaacgtctccaggccatcctgaga
ggagcagaggtacaagtggagttggagcatgctagcctggaggaggatgcagagccggga
ccatcctgtttgggcagtatgctcatgcctgctcaggaaactgcatgggacgagctcatc
cgcactggtcagatgacaccatttggaacccaggtccctcagaaacaggagaaaaaacct
agaaaaataatgctcaatgaggcatcgggcttcgaaaaatatctggcagatcaagcaaaa
ctgtcttttgaaaggaagaagcaagctactaataagaaagtagccagaaaagccccggtc
ctctgtgagtctaacacaggaccaaatgaaaacagaccaagccagggaagcaaagttgtc
tcaagagcagaccaacgcttgaagaagcacatgaggaagctgcagagaagggcactgcag
ttccagggcaaagtgcagttgccaaaggggaagaaatccctggagccccagggagggcca
gagacagaggtagactctgagggtgaggagtttggctccttccccacagaggagatggag
gaggaagaagaggaggaagaagaagacaggacaggggctgagctttctgaagatggcaca
gattatgaactgaaacctctacataggggccgaaaacgccagaaaaaagtccttgcacag
gaagttgatgatgactttttcccaagttcgggggaagaagctgaagccacaggggaggaa
ggaggaagaggaggaggtcgcaaagaagcaaggtgccgagatgatggagatgaagattat
tacaagcagcggttaaggaggtggaataaactgagactgcaagacaaagtgaaatgccta
aagctggatgatgattctgaggaaagcgatgctgaatttgatgaaggctttaaagtgccg
ggttttctgttcaaaaagctctttaagtaccagcagacaggtgttaggtggctgtgggaa
ttgcactgccagcaggcaggaggaattctgggagatgaaatgggattgggcaagaccatc
cagataattgccttcttggcaggtctgagctacagcaagatcaggactcgtggttcaaat
tacaggttcgaggggttgggccccaccgtaattgtctgtccaacaacagtgatgcatcaa
tgggtgaaagaattccacacgtggtggcctccattcagagtggcaattctgcatgaaacc
ggctcctacactcacaaaaaggagaagctagttcgagatattgctcattgccatggaatt
ttgatcacttcttactcctacattcgactaatgcaagatgccattagcaggtatgactgg
cactatgtgatcttagatgaaggacacaaaattcgaaacccaaatgctgctgtcaccctc
gcttgcaaacagttccgtacaccccatcggatcattctgtctggctcaccaatgcagaat
aacctccgagagctatggtcgctctttgactttgtcttccctggcaagttgggcacactg
cctgtgttcatggaacagttctctgttcccatcacaatgggaggatattccaatgcttct
cctgtccaggttaagactgcctataagtgtgcatgtgtcttacgggacactataaaccca
tacctgctgcggagaatgaagtcagatgtcaagatgagcctttctttgcctgataaaaat
gaacaggtcttattttgccgtcttactgatgagcaacatgaagtctaccagaatttcatt
gactccaaagaagtttatgggattctcaatggagacatgcagattttctctggacttgta
gccctaagaaaaatctgcaaccaccctgatctcttttctggaggtcccaagaatctcaaa
ggtcatccagatgaggaactggaagaaaatcagtttggatactggaaacgttctgggaaa
atgattgtggttgagtctttgttgaaaatatggcacaagcagggtcagcgagtgctgctg
ttttctcagtcaaggcagatgttacacatccttgaagtgttcctgagagcccggaattac
tcctatctcaaaatggatgggagtaccaccatagcttcacggcagcctctgattgcaaaa
tataatgaggatacatccatctttgtgtttcttctgaccacgagggtgggtggcctggga
gtcaacctgaccggggccaacagagtcatcatctacgaccctgactggaaccctagcacg
gacacacaggcccgggagcgagcgtggaggataggccagaagaagcaggtgactgtgtac
aggcttctgatggctggaaccattgaggaaaagatctaccaccgacaaatcttcaagcaa
tttctgacaaaccgagtgctaaaagacccaaaacaaaggcggtttttcaaatccaatgat
ctttatgagctgtttactctgactagccccgatgtaagccagagcaccgaaacaagtgca
atttttgcaggaattggatcagatgtgaagacaccctctcgctgtttaaaaagaaaggcc
acaccagcctttcgaacagaccacaccattccaaaatgcaccaagtttccagattctaac
atatctgccaagggggccacactgactgaggaggagccgaaggccgcaggagtagtcaca
tgtaatgagagcggccttttgaaaggcgccctgcacctgggtggcagtagcagtgctggg
gacagtggagaggcaggcatggagtctggacccaaggggctgccagtggccagtgcaagc
ggtgactgctcagattctgtcagagttggcaggacacctgggccctctggtgggggaagt
acttccgagaaggaagggccatcctgtgaaggagagagttgtccgctgaagacagaacct
ctttgggagaacggacgagtggaaagtcattttcataagcacaagtcaaaaacaaaacat
caagatatggcaggtgaagagacaccagggaaacccatgaaggcaaagtgccgtagagat
gccaaatttgagggaactcgcattccacatctggtgaggaaaaagcggtaccacaagcaa
gactctgagcaggaaagtcaggccacagaacaaaacagcgatgattatgttttacaaaag
cttttcaaaaagtcagtgggcgtgcacagcgtggtgaagcacgatgccattgtcgatggg
accagcccagactatgtgctggtggaggcggaagccagccgagtggcccaggaggccctg
aaagccctgaagctctcacgtcagcggtgtctgggggctgcatctggtgttcctacctgg
accggccacagggggacttctggtgcacctgcaggaataaagagcagatttggtcagaaa
aggaactctaagttaactgtgcagtctccttcttcagcatctccaacacaaaaatgccag
gacagcacattgaagaaggaaggaaaagatggtgccttggagcacttcagtggcaaagca
gaagaggcagagtcttcctccagggccctggcttcttccttactcttggccaggatgaga
gcaagaaaccacctgattctgccagagcgcttagagagtgacagtggactccttccagag
acttctgccccactgcctactgccacagaacacgacgacctactggtagagatgaggaac
ttcattgcttttcaggctcatgtggacggccaggctagcactcaagagatactgcaagag
ttcgaatccaagctgtccacctcacagtcttgtgtcttccgagagctattgagaaatctg
tgcacttttcatagaacttctggtggagaagggatttggaaactgaagccggagtactgc
tga
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integrated database retrieval system
