Dipodomys ordii (Ord's kangaroo rat): 105999059 Help Entry 105999059         CDS       T07834                                  Symbol Smarca4 Name (RefSeq) transcription activator BRG1   KO K11647   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] Organism dord  Dipodomys ordii (Ord's kangaroo rat) Pathway dord03082   ATP-dependent chromatin remodeling dord04714   Thermogenesis dord05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:dord00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     105999059 (Smarca4)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     105999059 (Smarca4)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     105999059 (Smarca4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dord03021]     105999059 (Smarca4)    03036 Chromosome and associated proteins [BR:dord03036]     105999059 (Smarca4) Transcription machinery [BR:dord03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      105999059 (Smarca4) Chromosome and associated proteins [BR:dord03036]  Eukaryotic type   Histone modification proteins    HDAC complexes     REST complex      105999059 (Smarca4)   Chromatin remodeling factors    BAF complex     105999059 (Smarca4)    PBAF complex     105999059 (Smarca4)    GBAF(ncBAF) complex     105999059 (Smarca4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom Helicase_C SnAC HSA BRK QLQ HDA2-3 DEAD DUF2009 Motif Other DBs NCBI-GeneID:  105999059 NCBI-ProteinID:  XP_012889400 Ensembl:  ENSDORG00000002544 UniProt:  A0A1S3GL29 LinkDB All DBs Position Unknown AA seq 1494 aa AA seqDB search MSAPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHGMVGPSPGPPSAGHPLPSQG PGGYPQDAMHPMHKPMESMHEKGIADDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPLVPLHQKQSRITPIQKPRG LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES GSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQTFGAVLFLQWRGDLVTSRGGSR SPTLPVLALLPATRASPWRTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFN VLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPL QNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRP FLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKT LMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRA TNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLL STRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKI LAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCGAGSGSASFAHS APPPAGVPPDMEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRK PRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKVDAW QRRAGVRRERAGSPAATNGLSTRIYEDSIVLQSVFTSVRQKIEKEDDSEGDDSDEEEEAE EEGSESESDARAVRNGAFTAPAGLPASARTAADAPFPFHSLQECCRNTGLGTGQ NT seq 4485 nt NT seq  +upstreamnt  +downstreamnt atgtccgctccagacccacccttgggagggacgcctaggccgggcccttccccgggcccc ggcccctcgcccggggccatgttgggccccagcccgggcccctcgccaggctccgcacac ggcatggtggggcccagccctggcccaccctcagcaggacacccgctccccagccagggt cccggcgggtaccctcaggacgccatgcacccgatgcacaagcccatggagtccatgcac gagaagggcatagcggacgacccgcgctacaaccagatgaaaggaatgggcatgcgctcc gggggccacgcggggatggggcccccgcccagccccatggaccagcactcccaaggttac ccctccccgctggggggctctgagcacgcctccagtcccgttccagccagtggcccatcc tcgggtccccagatgtcatccgggccaggaggggccccgctagatggggctgacccccag gctttggggcagcagaaccggggcccaaccccatttaaccagaaccagctgcaccagctc cgagctcagatcatggcctacaaaatgctggccaggggccagccccttcccgaccacctg cagatggctgtgcagggcaagcggccgatgcccgggatgcagcagcagatgccaacacta cctcctccttcagtgtccgccacgggccctggtcccggccccggccccggccctggccct ggtcctggcccagcacctccaaattacagcaggcctcacggtatgggagggcctaacatg ccccctccaggaccctcaggtgtgccccctgggatgcctggccagccccccggaggaccg cccaagccctggcctgaaggacccatggcaaatgctgctgcccccacaagcacccctcaa aagctgatccccccgcagccgacgggccgcccttcgccggcaccccctgccgtgcctccc gccgcctcccccgtgatgccaccacagacacagtcccccgggcagccagcccagcctgca cccctggttccactgcaccagaagcagagccggatcacccctatccagaagccccggggc cttgaccccgtggagatcctgcaggagcgcgagtacaggcttcaggctcgcatcgcacac cgaattcaggaacttgaaaacctccctgggtccctggccggggatctgcgaaccaaagcg accattgagctcaaggccctcaggctgctcaacttccagaggcagctgcgccaggaggtg gttgtgtgcatgcggagggacacggcgctggagacggctctcaacgccaaggcctacaag cgcagcaagcgccagtccctgcgcgaggcccgcatcaccgagaagctggagaagcagcag aagatcgagcaggagcgcaagcgccgccagaaacaccaggaatacctcaacagcattctc cagcacgccaaggacttcaaggagtaccacagatccgtcacaggcaaaatccagaaactc accaaggcggtggccacctaccatgccaacaccgagcgggagcagaagaaagaaaatgag cggatcgagaaggagaggatgcggaggctcatggcggaggatgaggagggctaccgcaaa ctcatcgaccagaagaaggacaagcgcctggcctacctcctgcagcagacggacgagtac gtggccaacctcaccgagctggtgcggcagcacaaggccgcccaggtcgccaaggagaaa aagaagaaaaagaaaaagaagaaggcagaaaacgccgaaggacagacaccggcaatcggc ccggatggcgagcctctggatgaaaccagccagatgagtgaccttccggtgaaagtgatc cacgtggagagcgggaagatcctcacgggcaccgatgcccccaaagccggccagctggag gcttggctggagatgaacccagggtatgaagtggctccaaggtctgatagcgaagagagt ggttcagaggaggaggaggaggaggaggaggaagagcagcctcagcccgcgcagcccccc accctgcccgtggaggagaagaagaagatccccgatccagacagcgatgacgtctcagag gtggacgcacggcacatcatcgagaatgccaagcaagacgtcgatgatgagtatggcgtg tcacaggccctcgcccgcggcctgcagtcctactatgctgtggctcatgctgtcaccgag agagtcgacaagcagtcggcgctgatggttaatggggtcctcaaacagtaccagaccttc ggtgccgtgttgttcctgcagtggaggggggacctagtgacaagcaggggaggctctcgg tcccccacgctcccagtgctggccctgctccctgccacgcgagcctccccttggcggacg ctgtcaaactgggcgtatgaatttgacaagtgggccccctccgtggtgaaggtgtcctac aagggctccccggcagcaaggcgggctttcgtcccccagctccgcagcgggaagttcaac gtgctgctgaccacctacgagtacatcatcaaagacaagcacatcctcgccaagatccgc tggaagtacatgatcgtggacgagggccaccgcatgaagaaccaccactgcaagctcacg caggtcctcaacacgcactacgtggccccgcgccgcctgctgctcacgggcaccccgctg cagaacaagctgcccgagctgtgggcactgctcaacttcctgctgcccaccatcttcaag agctgcagcacgttcgagcagtggttcaacgcgcccttcgccatgaccggggagaaggtg gacctgaacgaggaggagaccatcctcatcatccgccgcctccacaaggtgctgcgcccc ttcctgctgcggcgcctcaagaaggaagtcgaggctcagttgcccgaaaaggtggagtac gtcatcaagtgtgacatgtctgccctgcagcgcgtgctgtaccgccacatgcaggccaag ggcgtgctgctcaccgacggctcagagaaggacaagaagggcaaaggcggcacgaagacg ctgatgaacaccatcatgcagctgcgcaagatctgcaaccacccctacatgttccagcac atcgaggagtccttttctgagcacttggggttcactggcggcatcgtccaaggcctggac ctgtaccgagcctcgggcaaattcgaactgctcgaccgaattcttcccaaactccgggcc accaaccacaaagtgctgctattctgccaaatgacctcgctcatgaccatcatggaagac tacttcgcttaccgcggcttcaaatacctcaggctggacggcaccacgaaagccgaggac cggggcatgctgctgaaaaccttcaacgagcccggctccgagtacttcatcttcctgctc agcacccgcgccggcgggctgggcctcaacctgcagtcggctgatactgtgatcattttc gacagtgactggaacccccaccaggacctgcaagcgcaggaccgcgcccaccgcatcggg cagcagaacgaggtgcgtgtgctgcgcctgtgcaccgtcaacagcgtggaggagaagatc ctggcggccgccaagtacaagctcaacgtggaccagaaggtgatccaggcgggcatgttc gaccagaagtcgtcgagccacgagcggcgcgccttcctgcaggccatcctggagcacgag gagcaggacgagagcagacactgcggcgcgggcagcggcagtgccagcttcgcccactct gcccctccgccagcgggcgtcccccccgacatggaggagccgccgctaaaggaggaagac gaggtgcccgacgacgagaccgtcaaccagatgatcgcccggcacgaagaggagttcgac ctgttcatgcgcatggatctggaccggcggcgggaggaggcccgcaaccccaagcgcaag ccgcggctgatggaggaggacgagctcccgtcgtggatcatcaaggacgacgcggaggtg gagcggctgacgtgcgaggaggaggaggagaagatgttcggccgcggctcgcgccaccgc aaggaggtggactacagcgactcgctcaccgagaagcagtggctcaaggtagacgcctgg cagcgccgcgcgggcgtgaggcgggagcgcgcgggcagccccgcggccactaacgggctc tcaacaaggatctacgaggactccatcgtgctgcagtccgtgttcaccagcgtgcggcag aagatcgagaaggaggacgacagcgagggcgacgacagcgacgaggaggaggaggcggag gaggaaggctcggagtcggagtctgacgcccgcgccgtccggaacggtgccttcacggct cctgccgggctccccgctagcgcgcggacggctgcggacgcgccctttcccttccactcc cttcaggagtgctgccggaacactggcctgggcacgggacagtga

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