Dipodomys ordii (Ord's kangaroo rat): 105999511
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Entry
105999511 CDS
T07834
Symbol
Pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
105999511 (Pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dord01009
]
105999511 (Pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dord04515
]
105999511 (Pcdh20)
Protein phosphatases and associated proteins [BR:
dord01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105999511 (Pcdh20)
Cell adhesion molecules [BR:
dord04515
]
Cadherins
Protocadherins
105999511 (Pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
105999511
NCBI-ProteinID:
XP_012890038
UniProt:
A0A1S3GMD7
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MRGPGNARSSSRALAVSWRPATWHPRLDMGRLSRPSSSSSSRSSRSSSSSSRSSHRNLPH
VLLIFLFVGPFTCLASYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAAGRAEPQQAQ
PPERAGAQWNPPLSFSLASGGLSGQYVTLDNRSGELHTSTQEIDREALCVDEGGAAAWGS
SIAISSSPSSDSCLLLLDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQILVWVPENAP
VNTRLAIEHPAVDPDIGINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDREKQ
DEYISIIIAEDGGSPPLLGSATLTIGISDINDNCPLFVDSQINVTVYGNATVGTPIAVVQ
AVDRDLGTNAQITYTYSQKVPQASRDLFHLDETTGVITLFSKIGGSVLQMHKLTVLANGP
GCIPAVITALVSIIKVIFRPPEIVPRYIANEIDGVVYLKELEPVNTPIAFFTIRDPEGKY
KINCYLEGDGPFRLSPYKPYSNEYLLETIKPMDYELQQFYEIAVVAWNSEGFHVKRIIKV
QLLDDNDNAPVFLQPLIELTIEENNAPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFS
LDSVTGVLTVSTQLDREEKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKD
FSFFVPENFPGYGEIGIISVTDADAGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDRE
QQSSYTLWVEAVDGGEPALSSTTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSP
ITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVK
VSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVES
ASCVPTLVALSVISLGSITLVTGMGIYICLRKGKKHHRKDDNLEVQIPLKGKMDLHMRER
KPMDISNI
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcccaggcaatgcgcgcagcagctctcgggccctggcagtgagctggcgcccg
gcgacctggcacccgcgcctggatatggggcgcctaagtcgtcccagcagcagcagcagc
agccgcagcagccgcagcagcagcagcagcagccgcagcagccacaggaacctgccgcat
gtgcttctaattttcctcttcgtgggacccttcacctgcctggcgagttacagccgggcc
acagagctcctgtacagcctgaacgagggactacccgccggggtgctgattggcagcctg
gctgaggacttgcggctggtgcccagggctgcggggagagcggagccacagcaggcgcag
ccaccggagcgcgctggtgcgcagtggaacccgcctctctctttcagcctggcttccgga
ggcctgagtggccagtatgtgaccctggacaacagatctggggagctgcacacttctacc
caggagatcgaccgagaggccctgtgtgtggacgagggtggagcagctgcctggggcagc
agcattgccatctcttcctccccttcttctgattcttgccttttgctcctggatgtgttg
gtcctgcctcaagaatacttcaggttcgtgaaggtgaaaattgccatcagagacatcaat
gacaatgctccgcagttccctgtttcccaaatcctggtgtgggttccggaaaatgcacct
gtcaatacccggctggccattgagcaccctgctgtggaccctgatataggcattaatgga
gtgcagacctatcgcttactggactaccatggcatgtttaccctggacgtggaggagaat
gagaatggggagcgcactccttacttaattgtcatgggtgctctggacagggaaaagcag
gacgagtacataagcatcatcatagcagaggatggtgggtctccgccactgttgggaagt
gccaccctgacaattggcataagtgacataaatgacaattgtcctctcttcgtagattca
caaatcaatgtcactgtatatgggaatgctacagtgggcaccccgattgcagttgtgcag
gctgtggatagagacttaggaacaaatgcccagatcacttatacttacagccagaaagtc
ccacaggcatccagggatttattccatctcgatgaaacgactggagtcattacacttttc
agcaagatcggaggaagtgttttacaaatgcacaagctcaccgtcctcgccaacgggcca
ggctgcatccctgccgtgatcactgccctggtgtccattatcaaagtcattttcagacca
cccgaaattgtcccacgttacatagcgaacgagatcgacggtgtggtttatctgaaagaa
ctggaacccgtgaacacccctattgcattcttcaccatccgagatccagaaggtaaatac
aagattaactgctacctggagggtgatgggccatttaggttatcaccctacaaaccgtac
agtaatgaatatttgctagagactatcaaacctatggactacgagctacagcagttctat
gaaatagctgttgtggcctggaactcagagggatttcacgtcaaaagaatcattaaagta
caacttttagatgataatgataatgcacctgttttccttcagcccttgattgaactaacc
attgaagaaaacaatgcacccaatgcctttttgactaagctgtatgccactgatgctgac
agtggagagagaggccaagtttcctatttcctgggacccgacgctccttcctatttttcc
ttagacagtgtcacaggggttctgactgtctcaactcagctggacagggaagagaaagaa
aaatacaggtacacagtcagagccgtggactgtgggaagccaccgagagaatcggtggcc
actgtggctctcaccgtgctggataaaaatgacaacagccctaggttcatcaacaaggac
ttcagcttttttgtgcccgaaaacttcccaggctatggagagatcggcatcataagtgtc
actgatgcagatgctgggcaaaatggatgggttgccctttcagtggtgaaccagagtgac
atttttgttatcgacacgggaaagggcatgttgagagcaaaagtgtctttggaccgagag
cagcaaagctcctatactttgtgggtcgaagctgtggatgggggtgagccggccctttct
tctaccacaaaaatcacaattctccttcttgatatcaatgacaacccccctctggtttta
tttcctcagtctaatatgtcttatctgctggtactgccttccactctccctggctcccca
attacagaggtctatgctgtggacaaagacacaggcatgaatgctgtgatagcttacagc
atcatagggaggagaggccctagaccagagtcctttaggattgaccccaaaacaggcaac
ataacattggaagaggcattgctacagacagattatggactgcatcgcttactggtcaaa
gtgagtgaccatggttatcctgaacctctccattccaccgtcatggtgaacctgtttgtc
aatgacactgtcagcaatgagagctatattgaaagtcttttaaggaaagaaccagagatt
aacatagaagagaaggaaccacagatctcaatagaaccaacccacaggaaggttgagtct
gcatcctgtgtgcctaccttagtagctctgtctgtcataagcttgggttctatcacactg
gtaacagggatgggcatatatatctgcttgaggaaagggaaaaaacatcacaggaaagat
gacaatttggaagtacagattccactgaaaggaaaaatggacttgcatatgagagagagg
aaaccgatggatatttccaatatttga
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