KEGG   Dipodomys ordii (Ord's kangaroo rat): 105999511
Entry
105999511         CDS       T07834                                 
Symbol
Pcdh20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    105999511 (Pcdh20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dord01009]
    105999511 (Pcdh20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dord04515]
    105999511 (Pcdh20)
Protein phosphatases and associated proteins [BR:dord01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105999511 (Pcdh20)
Cell adhesion molecules [BR:dord04515]
 Cadherins
  Protocadherins
   105999511 (Pcdh20)
SSDB
Motif
Pfam: Cadherin Cadherin_CELSR2_9th Cadherin_2
Other DBs
NCBI-GeneID: 105999511
NCBI-ProteinID: XP_012890038
UniProt: A0A1S3GMD7
LinkDB
Position
Unknown
AA seq 968 aa
MRGPGNARSSSRALAVSWRPATWHPRLDMGRLSRPSSSSSSRSSRSSSSSSRSSHRNLPH
VLLIFLFVGPFTCLASYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAAGRAEPQQAQ
PPERAGAQWNPPLSFSLASGGLSGQYVTLDNRSGELHTSTQEIDREALCVDEGGAAAWGS
SIAISSSPSSDSCLLLLDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQILVWVPENAP
VNTRLAIEHPAVDPDIGINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDREKQ
DEYISIIIAEDGGSPPLLGSATLTIGISDINDNCPLFVDSQINVTVYGNATVGTPIAVVQ
AVDRDLGTNAQITYTYSQKVPQASRDLFHLDETTGVITLFSKIGGSVLQMHKLTVLANGP
GCIPAVITALVSIIKVIFRPPEIVPRYIANEIDGVVYLKELEPVNTPIAFFTIRDPEGKY
KINCYLEGDGPFRLSPYKPYSNEYLLETIKPMDYELQQFYEIAVVAWNSEGFHVKRIIKV
QLLDDNDNAPVFLQPLIELTIEENNAPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFS
LDSVTGVLTVSTQLDREEKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKD
FSFFVPENFPGYGEIGIISVTDADAGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDRE
QQSSYTLWVEAVDGGEPALSSTTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSP
ITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVK
VSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVES
ASCVPTLVALSVISLGSITLVTGMGIYICLRKGKKHHRKDDNLEVQIPLKGKMDLHMRER
KPMDISNI
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgcgcggcccaggcaatgcgcgcagcagctctcgggccctggcagtgagctggcgcccg
gcgacctggcacccgcgcctggatatggggcgcctaagtcgtcccagcagcagcagcagc
agccgcagcagccgcagcagcagcagcagcagccgcagcagccacaggaacctgccgcat
gtgcttctaattttcctcttcgtgggacccttcacctgcctggcgagttacagccgggcc
acagagctcctgtacagcctgaacgagggactacccgccggggtgctgattggcagcctg
gctgaggacttgcggctggtgcccagggctgcggggagagcggagccacagcaggcgcag
ccaccggagcgcgctggtgcgcagtggaacccgcctctctctttcagcctggcttccgga
ggcctgagtggccagtatgtgaccctggacaacagatctggggagctgcacacttctacc
caggagatcgaccgagaggccctgtgtgtggacgagggtggagcagctgcctggggcagc
agcattgccatctcttcctccccttcttctgattcttgccttttgctcctggatgtgttg
gtcctgcctcaagaatacttcaggttcgtgaaggtgaaaattgccatcagagacatcaat
gacaatgctccgcagttccctgtttcccaaatcctggtgtgggttccggaaaatgcacct
gtcaatacccggctggccattgagcaccctgctgtggaccctgatataggcattaatgga
gtgcagacctatcgcttactggactaccatggcatgtttaccctggacgtggaggagaat
gagaatggggagcgcactccttacttaattgtcatgggtgctctggacagggaaaagcag
gacgagtacataagcatcatcatagcagaggatggtgggtctccgccactgttgggaagt
gccaccctgacaattggcataagtgacataaatgacaattgtcctctcttcgtagattca
caaatcaatgtcactgtatatgggaatgctacagtgggcaccccgattgcagttgtgcag
gctgtggatagagacttaggaacaaatgcccagatcacttatacttacagccagaaagtc
ccacaggcatccagggatttattccatctcgatgaaacgactggagtcattacacttttc
agcaagatcggaggaagtgttttacaaatgcacaagctcaccgtcctcgccaacgggcca
ggctgcatccctgccgtgatcactgccctggtgtccattatcaaagtcattttcagacca
cccgaaattgtcccacgttacatagcgaacgagatcgacggtgtggtttatctgaaagaa
ctggaacccgtgaacacccctattgcattcttcaccatccgagatccagaaggtaaatac
aagattaactgctacctggagggtgatgggccatttaggttatcaccctacaaaccgtac
agtaatgaatatttgctagagactatcaaacctatggactacgagctacagcagttctat
gaaatagctgttgtggcctggaactcagagggatttcacgtcaaaagaatcattaaagta
caacttttagatgataatgataatgcacctgttttccttcagcccttgattgaactaacc
attgaagaaaacaatgcacccaatgcctttttgactaagctgtatgccactgatgctgac
agtggagagagaggccaagtttcctatttcctgggacccgacgctccttcctatttttcc
ttagacagtgtcacaggggttctgactgtctcaactcagctggacagggaagagaaagaa
aaatacaggtacacagtcagagccgtggactgtgggaagccaccgagagaatcggtggcc
actgtggctctcaccgtgctggataaaaatgacaacagccctaggttcatcaacaaggac
ttcagcttttttgtgcccgaaaacttcccaggctatggagagatcggcatcataagtgtc
actgatgcagatgctgggcaaaatggatgggttgccctttcagtggtgaaccagagtgac
atttttgttatcgacacgggaaagggcatgttgagagcaaaagtgtctttggaccgagag
cagcaaagctcctatactttgtgggtcgaagctgtggatgggggtgagccggccctttct
tctaccacaaaaatcacaattctccttcttgatatcaatgacaacccccctctggtttta
tttcctcagtctaatatgtcttatctgctggtactgccttccactctccctggctcccca
attacagaggtctatgctgtggacaaagacacaggcatgaatgctgtgatagcttacagc
atcatagggaggagaggccctagaccagagtcctttaggattgaccccaaaacaggcaac
ataacattggaagaggcattgctacagacagattatggactgcatcgcttactggtcaaa
gtgagtgaccatggttatcctgaacctctccattccaccgtcatggtgaacctgtttgtc
aatgacactgtcagcaatgagagctatattgaaagtcttttaaggaaagaaccagagatt
aacatagaagagaaggaaccacagatctcaatagaaccaacccacaggaaggttgagtct
gcatcctgtgtgcctaccttagtagctctgtctgtcataagcttgggttctatcacactg
gtaacagggatgggcatatatatctgcttgaggaaagggaaaaaacatcacaggaaagat
gacaatttggaagtacagattccactgaaaggaaaaatggacttgcatatgagagagagg
aaaccgatggatatttccaatatttga

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