Dipodomys ordii (Ord's kangaroo rat): 106000446
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Entry
106000446 CDS
T07834
Symbol
Apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106000446 (Apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dord03400
]
106000446 (Apex1)
Enzymes [BR:
dord01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
106000446 (Apex1)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
106000446 (Apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
RNA_pol_N
Motif
Other DBs
NCBI-GeneID:
106000446
NCBI-ProteinID:
XP_012891156
Ensembl:
ENSDORG00000001616
UniProt:
A0A1S3GQR2
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MGNTVKIFLRWATRYCCRRTFVTAMPKRGKKGAVVEDGEEPKTEPEAKKTKVGTKKNEKE
AAGEGPVLYEDPPDQKTSPSGKAATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQE
TKCSENKLPGELQELSGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGR
VIVAEFDTFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASHKPLVLCGDLNVAHE
EIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPTTAYAYTFWTYMMNARSK
NVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaccgtaaaaatattccttaggtgggcgacgaggtactgttgccgaaggaca
ttcgttacagcgatgccaaagcgtgggaaaaagggagcagtagtagaagacggggaagag
cccaagacagagccagaggctaagaagactaaagtgggaacaaagaaaaatgaaaaagaa
gctgcaggtgaaggtccagtcctatatgaggaccctccagatcagaaaacttcacccagt
ggcaaggctgccacactcaagatctgctcctggaatgtggatgggcttcgcgcctggatt
aagaagaaaggtttagattgggtgaaggaagaagctccagatatcctgtgcctccaagag
actaaatgttcagagaacaaactaccaggtgaacttcaagaactgtctggactctcgcat
cagtactggtcagctccctcagacaaggaaggatacagtggtgtgggtctgctttcccgc
cagtgcccactcaaagtctcttatggcattggtgaggaggaacacgatcaagaaggccga
gtgattgtggctgaatttgacacatttgtacttgtgacagcctatgtacctaatgcaggt
cggggtctagtaagactggaataccggcagcgttgggatgaagcctttcgcaagtttctc
aagggcttggcttctcacaaaccccttgtgctatgtggggacctcaatgtggctcatgaa
gaaatagaccttcgtaaccccaagggaaacaaaaagaatgctggttttactccacaagag
cgccaaggctttggggagttgttgcaggcggtgcccctggctgatagctttcggcacctc
tatcccaccacagcctacgcttacactttttggacttacatgatgaatgctcgctccaag
aacgttggttggcgccttgattactttttgttgtcccactctcttttacctgcattgtgc
gacagcaagatccgttccaaggcccttggcagtgaccactgtcccattaccctgtaccta
gccctgtga
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integrated database retrieval system
