Dipodomys ordii (Ord's kangaroo rat): 106000634
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Entry
106000634 CDS
T07834
Symbol
Smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04110
Cell cycle
dord04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106000634 (Smc1a)
04114 Oocyte meiosis
106000634 (Smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dord03036
]
106000634 (Smc1a)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106000634 (Smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
106000634 (Smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_hinge
SMC_N
AAA_23
AAA_29
AAA_21
AAA_15
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
106000634
NCBI-ProteinID:
XP_012891368
Ensembl:
ENSDORG00000004517
UniProt:
A0A1S3GR43
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGGSQGE
DSVSGSQRTSNIYAREALIEIDYGDLCEDLKLQGTLFHYYM
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgaaactgattgagatcgagaactttaagtcgtacaagggtcgacagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtactaggtgaaaaaaccagcaaccttcgagtaaagacc
ctacgggatctgattcatggtgctcctgtgggcaagccagctgccaatcgggcctttgtc
agcatggtctattctgaggaaggtgctgaagatcgcacctttgcccgtgtcattgtagga
ggttcttctgaatacaagatcaacaacaaagtggtccaactacatgaatacagtgaagag
ttagagaagttgggcattctcatcaaagctcgtaacttcctcgtcttccagggtgctgtg
gagtctattgccatgaagaaccccaaggagaggacagctctatttgaagagattagtcgc
tctggggagctggcacaggagtatgataagcgaaagaaggaaatggtaaaggctgaagaa
gatacacaatttaattatcatcgtaagaaaaatattgcagctgaacgtaaggaggccaaa
caggagaaagaagaggcagatcgttaccagcgcctgaaggacgaggtggtacgtgctcaa
gtacagttgcagctcttcaagctttaccataatgaagtagaaattgaaaaactcaataag
gaactggcttctaagaacaaagagattgagaaggacaagaaacggatggacaaagtagag
gatgagctgaaggagaagaagaaagagctgggcaaaatgatgcgggagcagcagcagatt
gagaaggagatcaaggagaaggattcagagctgaatcagaagcgacctcagtacatcaaa
gctaaggagaatacctcccacaagattaaaaagctggaagcagcgaaaaaatctcttcag
aatgctcagaagcactataagaagcgtaaaggtgatatggatgagctggagaaggagatg
ttatctgtggagaaggcccgacaggagtttgaagaacggatggaagaggagagtcagagt
cagggcagagacttgaccctggaagagaaccaggtgaagaaataccatcggttgaaagaa
gaagccagcaagagagcagctactttggcccaagagctggagaagttcaatagagaccag
aaagctgatcaggaccgtctggatctagaagagcggaagaaagtagaaacagaggccaag
atcaagcaaaagcttcgagagattgaagagaatcagaaacggattgagaagctggaagaa
tacattacgaccagcaagcaatccctagaggagcagaagaagttagagggagaactgaca
gaggaagtagagatggccaaacggcgtattgatgagatcaataaggaactaaatcaggtg
atggagcagttgggagatgcccgtattgaccgccaggagagcagtcgccagcagcgaaag
gcagagataatggaaagcatcaagcgcctttaccctggctctgtgtatggccgtctcatt
gacctctgccagcccacacaaaagaaataccagatagcggtgacaaaggttttgggcaag
aacatggatgccattattgtagattccgagaagacaggccgagattgtattcagtatatc
aaggagcagcgtggggagcctgagaccttcttgcctcttgactacctagaggtgaaacct
acagatgagaaacttcgggagctcaagggagccaagctagtgattgatgtgatccgctat
gagccacctcatatcaaaaaagccctgcagtatgcttgtggcaatgcccttgtctgtgac
aatgtggaagatgcccgtcggattgcctttggaggccaccagcgccacaagacggtggca
ctggatgggaccctgttccagaagtcaggagtcatctctggtggggccagtgacctgaag
gccaaggcaaggcgctgggatgagaaagcagtggacaagttgaaagagaagaaggaacgt
ttgacagaggagctgaaagaacagatgaaagcaaagaggaaagaggcagagctgcgtcag
gtgcagtctcaggcccatggactgcagatgcgactcaagtactcacagagtgacctggaa
cagactaagacaagacatctggccctaaatctccaggaaaagtctaagctggagagtgag
ctggccaactttgggcctcgcattaatgatatcaagagaatcattcaaagccgcgagaga
gaaatgaaggacttgaaggagaagatgaaccaggtagaagatgaggtgtttgaagagttt
tgtcgggagataggtgtgcgcaacatccgggagtttgaagaagagaaggtgaagcggcag
aatgaaattgccaagaagcgtttggagtttgaaaatcagaagactcgcttgggcatccag
ttggattttgaaaagaaccaattgaaggaggaccaggataaagtacacatgtgggaacag
acagtgaagaaggatgaaaatgagatagaaaagctcaagaaggaagaacaaagacatatg
aaaatcatagatgagaccatggcccagctacaagatctgaagaatcagcacctggccaag
aagtctgaagtgaatgacaagaaccatgaaatggaggagattcgtaagaaactgggtggt
gccaacaaggaaatgacccatttacagaaggaggtgacagccattgagactaagctggaa
cagaagcgcagtgaccgccacaacttgctacaggcctgcaagatgcaagacatcaagttg
ccactgtcaaagggcaccatggatgatatcagtcaagaagagggtggctcccagggagag
gattcagtaagtggatcccagagaacttccaacatctatgcacgagaggccctcattgag
attgactatggcgacctgtgtgaggatctcaagttacaaggtacattgtttcattattac
atgtaa
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