Dipodomys ordii (Ord's kangaroo rat): 106000843
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Entry
106000843 CDS
T07834
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106000843 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
106000843 (Vps35)
Membrane trafficking [BR:
dord04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
106000843 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
Imm5
FerA
ADIP
Motif
Other DBs
NCBI-GeneID:
106000843
NCBI-ProteinID:
XP_012891522
Ensembl:
ENSDORG00000002541
UniProt:
A0A1S3GU88
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
VFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIF
SQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHI
ATSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYN
TEIVSQDQVDSIMNLVSTLIQDQPDQPIEDPDPEDFADEQSLVGRFIHLLRSDDPDQQYL
DDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQ
AFSVYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRA
VSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIY
FYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRQESRESEGP
IYEGLVL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaggatgagcaggaaaagctcctggatgaagccata
caggctgtgaaggtacagtcctttcagatgaagagatgcctggacaaaaacaaacttatg
gacgctctgaaacatgcttctaacatgcttggtgaactccggacgtctatgttatcacca
aaaagctactacgaactttatatggctatttctgatgagctacactacttggaggtctac
ctgacagatgaatttgctaaaggacgaaaagtagcagatctctatgagcttgtacaatat
gctggaaacataatcccaaggctctatctgttgattacagttggagttgtatatgtcaag
tcatttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgta
cagcatccattgagaggtttatttcttcggaattatcttcttcagtgtaccagaaacatt
ttacctgatgaaggagagccaacagatgaagaaacaactggtgatattagtgactccatg
gattttgtactgctcaactttgcagaaatgaacaagctctgggtgcgaatgcaacatcaa
ggacatagccgagatagagaaaaaagagaacgagaaagacaagaactgcgaattttagtg
ggaacaaatttggtgcgcctcagtcagttggaaggtgtaaatgtggaacgttacaaacag
gtttttcctgatgaatttcatctccagacattgaatccttttcttcgggcctgtgctgag
ttacaccaaaatgtaaatgtaaaaaatataatcattgctttaattgacagattagcttta
tttgctcatcgtgaagatggacctggaatcccagctgatattaaactttttgacatattt
tcacaacaggtggctacagtgatacagtctagacaagatatgccatcagaggatgttgtg
tctttacaagtctctctaattaatcttgcaatgaaatgttacccagatcgtgtggactat
gttgataaagttctagaaacaacagtggagatattcaataagctcaaccttgaacatatt
gctaccagtagtgcagtttcaaaggagctcaccagacttttgaagatacctgttgatact
tataacaatatcttaacagtcttaaaattaaaacattttcacccactctttgagtatttt
gactatgagtccagaaagagcatgagttgttatgtgctgagtaatgttctagattataac
acagaaattgtctctcaagaccaggtggactctataatgaatttggtatccacattgata
caagatcagccagatcaacctatagaagatcctgatccagaagactttgctgatgagcag
agccttgtgggccgattcattcatcttctgcggtctgatgaccctgatcagcagtatttg
gatgacaaatgggaaaagaaatgccagaagatcttttcatttgctcaccagactatcagt
gctttaattaaagcagagctggcagaattacctctaagactttttcttcaaggagcacta
gctgctggagaaattggttttgaaaatcatgaaacagtagcatatgaatttatgtcacag
gcattttctgtgtatgaagatgaaatcagtgattcaaaagcacagctggctgccataact
ttgatcattggtacttttgagaggatgaagtgcttcagtgaagagaatcatgaaccattg
aggactcagtgtgcactcgctgcatccaaacttctgaaaaaacctgatcagggccgagct
gtgagcacttgtgcacatcttttctggtctggcagaaacacagataaaaatggggaggag
cttcatggaggcaagagggtaatggaatgcttaaagaaagctctaaaaatagcaaatcag
tgcatggacccctctctacaagtgcagctttttatagaaattctgaatagatacatctat
ttttatgaaaaggaaaatgatgcggtaactattcaggttttgaaccagcttatccaaaag
attagagaagatcttccaaatctagagtccagtgaagaaaccgagcagattaacaaacat
tttcataacacactggaacacttgcgcttgaggcaggaatcacgagaatctgaggggcca
atctatgaaggtctcgtcctttaa
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