KEGG   Dipodomys ordii (Ord's kangaroo rat): 106001311
Entry
106001311         CDS       T07834                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03020  RNA polymerase
dord03420  Nucleotide excision repair
dord05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106001311
  09124 Replication and repair
   03420 Nucleotide excision repair
    106001311
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    106001311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dord03021]
    106001311
   03019 Messenger RNA biogenesis [BR:dord03019]
    106001311
   03400 DNA repair and recombination proteins [BR:dord03400]
    106001311
Transcription machinery [BR:dord03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106001311
Messenger RNA biogenesis [BR:dord03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106001311
DNA repair and recombination proteins [BR:dord03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106001311
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 106001311
NCBI-ProteinID: XP_012891870
Ensembl: ENSDORG00000010351
UniProt: A0A1S3GT49
LinkDB
Position
Unknown
AA seq 172 aa
MFYHISLEHEILLHPRYFDPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNMGAGVIQ
PGRGFVLYPVKYKAIVFQPFKGEVVDAVVTQVNKVGLFTEIGPMSSFISHHSIPSEMEFD
PNSNPPCYKTTDEDIVIQRDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccacatctccctggagcacgagatcctgctgcatccgcggtacttcgaccct
aacttgctcaacacggtgaagcaaaagctattcacggaggtggaggggacgtgcaccggg
aaatacggctttgtaattgctgtcaccaccatcgacaatatgggtgcaggtgtgatccaa
cctgggcgaggctttgtcctttatccagttaagtacaaagccattgttttccagcccttt
aaaggtgaagttgtggatgctgtggtcactcaggtgaacaaggttggacttttcactgaa
attgggcccatgtcttcctttatctcccatcattccatcccatcagagatggagtttgat
ccaaactccaacccaccttgttacaagacaacggatgaggacattgtgattcagcgggat
gacgagatccgcttgaaaattgtagggacccgcgtggacaagaatgacatttttgctatt
ggctccctgatggatgattatttggggcttgtgagctga

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