Dipodomys ordii (Ord's kangaroo rat): 106002214
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Entry
106002214 CDS
T07834
Symbol
Casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03013
Nucleocytoplasmic transport
dord03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106002214 (Casc3)
03015 mRNA surveillance pathway
106002214 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
106002214 (Casc3)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106002214 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
106002214
NCBI-ProteinID:
XP_012892585
UniProt:
A0A1S3GV80
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPGRDGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSVKEEKGEEKPETKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERANKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAARNYSRSGGFKEGRTGFRPVEAGGQHGGRSSETVKHDASYRSRRLEQTPVR
DPSPEADAPVLGSPEKEEAASETPAPVPDIAPPAPDRPIEKKSYSRARRTRTKVGDAVKA
PEEVPPPPEGLTSAPAVPETTPPSAKAGNWEAPVESATGGLEQDVAQLNLTEQNWGPGQP
SFLQPRDLRGVPKHMHI
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcaacgcgcttcgcaggacaccgaagacgaagaatcgggtgct
tcgggatcggacagcggtggctctccggggcgagacggtggcagctgcagcgggagtgct
ggaggcggcggcagcggctctctgccttcccagcggggcggccgtgccggggccctgcat
ctgcggcgggtggagagcgggggggccaagagcgcggaggagtccgagtgtgagagtgaa
gatggcatggaaggcgatgctgttctctcagattatgaaagtgcagaagactcagaaggt
gaagaaggggagtacagtgaagaagaaaactccaaagtggagctgaaatcagaagctaat
gatgctgctaattcttcagtaaaagaagagaagggagaagaaaagccagaaaccaaaggc
actgttactggagagaggcagagtggagatggacaggagagcacagagcctgtggagaac
aaagtgggtaagaagggacctaagcatttggatgatgatgaagataggaaaaatccagca
tacataccacggaaagggctcttctttgagcatgatctccgagggcaaactcaggaggag
gaagtcagacctaagggacgtcagcgaaagctatggaaggatgagggtcgctgggaacat
gacaagttccgtgaagatgagcaggccccaaagtcccgacaggagcttattgcgctttat
ggatatgacattcgctcagctcataatcctgatgacatcaaaccccgaagaatccggaaa
cctcgatttggcagtcctccacaaagagatccaaactggattggtgagcgggcaaacaag
tcccatcgccaccagggtcctgggggcaccctaccaccaagaacatttattaacaggaat
gcagcaggtactggtcgcatgtctgcagccaggaattattcccgatctgggggcttcaag
gaaggtcgtactggttttagacctgtggaagctggtgggcagcatggaggtcgttctagt
gagactgttaaacatgatgctagttaccggtcacggcgcctggagcagactcctgtgaga
gatccatctccagaagcagatgctcctgtgcttggcagtcccgaaaaggaagaagcagct
tcagagacaccagctcctgttcctgacattgcaccaccagcccctgacagacccattgag
aagaaatcctattctcgggccagaagaactcgaaccaaagttggggatgcagtgaaagct
cctgaagaggtcccccctccacccgaagggctgacctcagcacctgctgtccctgaaact
acccctccatctgctaaggctggcaactgggaggctccagtagagtctgctacaggtgga
ctggaacaagatgtggcacagctaaatctaacagaacagaattggggtccaggacagcct
tcattcctgcagccacgggacctccgaggtgtgcccaaacacatgcatatctag
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