Draconibacterium orientale: FH5T_04170
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Entry
FH5T_04170 CDS
T03072
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dori
Draconibacterium orientale
Pathway
dori03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dori00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FH5T_04170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dori03021
]
FH5T_04170
03400 DNA repair and recombination proteins [BR:
dori03400
]
FH5T_04170
Enzymes [BR:
dori01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FH5T_04170
Transcription machinery [BR:
dori03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FH5T_04170
DNA repair and recombination proteins [BR:
dori03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FH5T_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
ParM_N
Motif
Other DBs
NCBI-ProteinID:
AHW59053
UniProt:
X5D8J0
LinkDB
All DBs
Position
complement(1043622..1047890)
Genome browser
AA seq
1422 aa
AA seq
DB search
MAFKKDNKAKTSFSKVSVSLSSPEEILERSYGEVLKPETINYRTYKPERDGLFCERIFGP
VKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHISLVVPVAHIWYFKSLPNKI
GYLLGLPTKKLDTIIYYERYVVIQAGVKHQDGVKELDFLTEEEYLDILDTLPKENQFLDD
DDPNKFIAKMGAEALFDILSRLELDDLSFTLRHKANTETSQQRKNEALKRLQVVEAFRAS
KNLNRPEWMIVRVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAP
EVILRNEKRMLQEAVDSLFDNSRKSNAVKTENNRALKSLSDSLKGKQGRFRQNLLGKRVD
YSARSVIVVGPKLRIHECGIPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIVDRKDPVV
WEILENVLKGHPVMLNRAPTLHRLSIQAFQPVLIEGKAIQLHPLVCTGFNADFDGDQMAV
HLPLGNAAILEAQLLMLASHNLLNPANGAPIQVPSQDMVLGLYYMTKPRKGSRGEGMTFY
SAEEVTIAYEEKAIDLHAIIKVKVEDIDENGDYFNHIIETTVGRVLFNEFVPRQAGYVNQ
ILTKKSLRSIITDVFNKSGNAITVKFLDDIKNLGYTMAYRGGLSFNLGDVIIPEDKAEIV
GNGYQEVEEVINNYNMGFITNNERYNQVIDIWTHANAKLTNSVMKTISTDRQGFNSIYMM
LDSGARGSKEQIRQLCGMRGLMAKPQKSGSTGSQIIENPILANFKEGLSVLEYFISTHGA
RKGLADTALKTADAGYLTRRLVDVAQDVIISEDDCGTLRGLVASDVKNNEEVVASLFERI
VGRTTVHDIFHPLNGELIIKSGDEITEEIAKVIEDSPIETVEIRSVLTCESKVGVCAKCY
GRNLATGKKVQKGEATGVIAAQSIGEPGTQLTLRTFHVGGIAGNISAQSTVESKYDGYCE
IEELRSVSYKDDEGNDVEVVVSRLAELKIIDKNTKIPLSTHPLPYGCKLYVKNGQEIRKG
AMICDWDPFNGVIITEFDGKVEFENLIEGITFREESDEQTGYSERVIIETKDKTKNPTLK
IMDDAGEMIRSYNLPVGGHISVDNGQEVKAGKILVKIPRAAGKAGDITGGLPRVTELFEA
RNPSNPAVVSEVDGEVSLGKIKRGNREIIVTTKNGDVKRYLVPLSKQILVQENDYIRAGI
PLSDGATTPSDILAIKGPTAVQEYILNEVQDVYRMQGVKINDKHFEIIIRQMMRKVEIVD
PGDTRFLEKQIVDKNEFMSENDWIYNKKVVVDPGDAEGLKAGQIVSSRRLRDENSQLRRK
DKKLVESRDAIPATSSQILQGITRAALQTRSWLSAASFQETTKVLNEAAINGKMDYLDGL
KENVICGHLIPAGTGLKEYKNLVVGSKSEYDRLVDMRHSDNS
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaaaaaagataataaagcaaaaactagtttctcaaaagtttcagtaagcctt
tcttctcctgaagaaattctggaaagatcgtatggcgaggtactgaagccagaaacaatt
aactacagaacatataaaccagaacgtgatggtttgttttgtgagcgtattttcggaccg
gtaaaagactacgaatgtcactgtggaaaatacaaacgtatccgttataaaggaatcgtt
tgcgaccgttgtggtgttgaagtaaccgaaaagaaagtacgtcgtgagcgtatgggacac
atttcactggtggtaccggtagctcacatttggtatttcaaatcgttgcctaacaaaatt
ggttacctgcttggtttacctaccaaaaagctggataccattatttattacgaacgctat
gtggttatccaggctggtgtaaaacatcaggatggtgtaaaagaactggatttcttaact
gaagaagagtacctggatattctggatacgcttccaaaagaaaatcaattccttgatgat
gacgatccaaacaaattcatcgccaaaatgggtgctgaagcattgtttgatatccttagc
cgtttagagctggatgatttgtcattcacattgcgtcataaagcaaacaccgaaacatcg
cagcagcgtaaaaacgaggcgttaaaacgtctgcaggttgttgaggctttcagggcaagt
aaaaaccttaaccgtccggaatggatgatcgttagggtggtgcctgtaattcctcctgat
ttgcgtccgttggtgccactggatggtggtcgtttcgcaacatcagatttgaacgacctg
taccgaagagtaattatccgtaacaaccgtttgaaacgattgattgagattaaagctcct
gaggtaattttaagaaacgagaaacgtatgctacaggaagctgtagattcgttattcgat
aactcaagaaaatctaatgccgttaaaaccgaaaacaaccgcgctttaaaatcgctgtcc
gacagtttgaaaggtaagcaaggtcgtttccgtcagaaccttttgggtaaacgtgttgac
tattctgcacgttcggtaatcgttgttggtcctaaattaaggattcacgaatgcggtatt
ccaaaagatatggctgcagagctttacaaacctttcgtaatccgtaagttgattgaaaga
ggtattgtaaaaacggtaaaatcggcaaagaaaatcgttgacagaaaagacccggtagtt
tgggaaattcttgaaaacgtgctgaaaggacaccctgtaatgttgaacagggcacctacg
ctgcaccgtttgtcaattcaggccttccagcctgttcttatcgagggtaaagcaattcag
ctgcacccgttggtatgtacaggttttaacgccgacttcgacggtgaccagatggcggtt
cacttaccattgggtaatgctgcaattttggaagcacagttgttaatgcttgcttcgcac
aacctgttgaaccctgcaaacggcgcacctatccaggttccttcgcaggacatggttttg
ggtctgtactacatgaccaaaccacgtaaaggtagtcgtggcgaaggaatgactttctac
tcagctgaagaagtaacgattgcatacgaagagaaagcaatcgatcttcacgcaattatt
aaagttaaagttgaagacatcgatgaaaacggagattattttaaccatatcatcgaaaca
actgtaggtcgcgttcttttcaacgaatttgttccacgtcaggcaggttacgtaaaccag
attttgactaaaaaatcgttacgcagcattattaccgacgtattcaataagagtggtaac
gcaattaccgttaaattccttgatgatattaaaaacctgggttacacaatggcgtaccgt
ggtggtttgtcgttcaacttaggcgatgttatcattcctgaggataaagccgaaattgtt
ggtaacggttaccaggaagttgaagaggttatcaacaactataacatgggtttcattacc
aataacgaacgttacaaccaggttattgatatttggacacatgcgaacgcgaaacttacc
aactcggtaatgaaaaccattagtacggaccgccagggattcaactcaatttatatgatg
cttgactcgggtgcgcggggttcgaaagagcagattcgccagttatgcggaatgaggggt
ttgatggcaaaaccacaaaaatctggttctacaggttcgcagattattgaaaacccgatt
ttggcaaactttaaagaaggcctttcggtactggagtactttatttctactcacggtgct
cgtaaaggtttggcggataccgcacttaaaacagctgatgcgggttacttaacacgtcgt
ttggttgatgttgcccaggatgttatcatctcggaagacgactgcggaacattgcgtggt
ttggtagcttctgacgttaaaaataacgaagaagttgttgcatcattattcgaaagaata
gttggtcgtacaactgttcacgatattttccacccgttaaatggtgagttgatcattaaa
tcgggtgatgaaattactgaagagattgcgaaagtaatcgaagactcgccaattgaaacc
gttgaaattcgttcggtattaacctgtgaatcgaaagttggtgtttgtgccaagtgttac
ggacgtaacctggctaccggcaagaaagttcagaaaggtgaagctaccggtgttattgca
gcacagtcgattggtgagccgggtacacagcttacacttcgtaccttccacgtggggggt
atcgcaggtaacatctcagcacaatcaacagttgaatcgaaatacgatggatactgcgag
attgaagagcttcgttcggtatcgtacaaagatgacgaaggaaacgatgtggaggttgta
gtaagtcgtttggccgaattgaaaattatcgataaaaacactaaaattccactttctact
cacccacttccatacggttgtaaactgtatgtgaaaaacggtcaggaaatccgtaaagga
gcaatgatctgtgattgggacccatttaacggtgtaattattaccgaattcgatggtaaa
gtagaatttgagaacctgatcgaaggtattactttccgcgaagaatcggatgagcaaacc
ggttatagcgagcgcgtaattatcgaaacaaaagataagaccaaaaacccaactttgaag
attatggacgatgccggagaaatgatccgctcgtacaaccttccggttggaggtcacatc
tcggttgataacggacaagaggtgaaagcaggtaagattttggttaagattcctcgtgct
gccggtaaagcaggcgatatcacagggggtctgccacgtgttaccgaattattcgaggca
cgtaacccatctaaccctgcggttgtttctgaggttgacggtgaagtttcgttaggtaag
atcaaacggggtaaccgcgagatcattgttaccactaaaaacggcgatgtgaagagatac
cttgtaccgctgtcgaaacaaatccttgttcaggagaacgactacatcagagcaggtatt
ccattgtctgacggagcaacaactccttccgatattctcgcaattaaagggcctactgct
gttcaggaatacattttgaacgaagttcaggacgtgtaccgtatgcagggggtaaaaatt
aacgataaacactttgagattatcatccgccagatgatgcgtaaagtagaaatcgttgat
ccgggtgatacccgtttccttgaaaagcaaattgtggacaaaaacgaattcatgtctgaa
aacgactggatttacaacaaaaaagttgtagttgatccgggagatgctgaagggctgaaa
gccggacagattgtttcttcacgtcgtttgagagatgagaactcgcaactccgaagaaaa
gataaaaaactggtagagtcgagggatgcgattcctgcaacatcaagccagattcttcag
gggattacaagagcagcgttgcaaacacgcagctggttgtctgccgcatcgttccaggaa
acaacaaaagttcttaacgaagccgctattaacggtaaaatggattacctcgacggactg
aaagagaacgtaatttgtggtcacctgataccggcaggtaccggattgaaagaatacaaa
aaccttgttgttggctctaaatcagaatacgacaggttagtagatatgagacattcggat
aatagctaa
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integrated database retrieval system
