Draconibacterium orientale: FH5T_04345
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Entry
FH5T_04345 CDS
T03072
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dori
Draconibacterium orientale
Pathway
dori03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dori00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH5T_04345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dori03019
]
FH5T_04345
Enzymes [BR:
dori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FH5T_04345
Messenger RNA biogenesis [BR:
dori03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FH5T_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_C_2
Phage_integrase
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AHW59080
UniProt:
X5DV62
LinkDB
All DBs
Position
1082609..1083877
Genome browser
AA seq
422 aa
AA seq
DB search
MKFEDLKLHPAILKALKDENYSEPTSIQAQAIPLVLERKDVLGSAQTGTGKTAAFAIPII
QHLINTTRHEKGKRQIKSLVVTPTRELAIQIGESFDAYGKYSNLQNTVIFGGVPQNPQVR
QLQKGVDILVATPGRLLDLISQKHISLRDVKYFVLDEADRMLDMGFIHDINKLLKLLPKQ
RQSLFFSATMPTKILKLSQQILVNPKKVAVNPVSSTAETIQQQIYFTNKSDKKDLLLHIL
KNEELEQVLLFSRTKHGADRIVRNLRNKKIESAAIHGEKSQNQRQKALLRFKKGEIRVLV
ATDIAARGIDIDKLRYVINHDIPNEPETYVHRIGRCGRAGEEGVAISLCEPEENAYVKSI
EKLIKLKIDVADNNPFPQTDKPMNASEKKEFEAEKKRKRQEFFENRNKKRGNQNPGFRRK
RR
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaagatttaaaattgcatccggccatacttaaggcattaaaggatgaaaac
tactcggaaccaacctccattcaggcgcaggcaattccactggtattagaacgaaaagat
gttttgggtagcgcccaaaccggcaccggaaaaacggccgcttttgctattcctatcatt
cagcatttaataaacactacccgccacgaaaagggtaaacgacagataaaatcgctggtg
gttacccctacccgcgagctggccatacaaattggtgaaagttttgacgcatacggcaaa
tacagcaacctgcaaaacacggttatttttggtggggtgccgcaaaacccgcaggtacgc
caactgcaaaagggcgtcgatatactggttgccacacccggccgcctgctcgatttaatc
agtcagaagcatatttcgctgcgcgatgtaaagtactttgtgttagacgaggccgaccgg
atgctcgacatgggttttattcacgacatcaataaactgctgaagcttttacccaaacag
cggcaatcgttgttcttttcggccactatgccaacgaaaatactgaagctttcgcaacaa
attctggtgaatccgaaaaaggtggcggtgaacccggtttcctcaactgccgaaaccata
caacagcaaatctatttcaccaacaaaagcgataaaaaggacttactgttacacattctt
aaaaacgaagagctggagcaggtactgctgttttcgagaaccaaacatggcgccgaccgg
attgtacgcaacctgcgaaataaaaaaattgagagtgccgccattcatggcgaaaagagt
cagaatcaacgccaaaaggctttattgcggtttaaaaaaggagaaatacgcgtattggta
gccaccgatattgcggcaaggggtattgatattgacaaactgcggtatgtaattaaccac
gacatacctaacgagcccgaaacctatgtgcaccgtattggccgatgtggccgggccggc
gaagaaggtgtggctatttcgctgtgcgaaccggaagaaaatgcctatgtgaaaagcatt
gaaaagttgataaaactaaaaatcgatgtagccgataacaatccttttccgcagacagac
aaaccaatgaacgccagcgaaaagaaagagtttgaagcagaaaagaaacgtaaacggcaa
gagttttttgaaaaccgaaacaaaaagcgaggtaatcaaaacccgggatttagacggaag
agacggtag
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