Draconibacterium orientale: FH5T_04590
Help
Entry
FH5T_04590 CDS
T03072
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dori
Draconibacterium orientale
Pathway
dori03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dori00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH5T_04590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dori03019
]
FH5T_04590
03016 Transfer RNA biogenesis [BR:
dori03016
]
FH5T_04590
Enzymes [BR:
dori01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FH5T_04590
Messenger RNA biogenesis [BR:
dori03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FH5T_04590
Transfer RNA biogenesis [BR:
dori03016
]
Prokaryotic type
tRNA degradation factors
FH5T_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH_KhpA-B
KH-I_KHDC4-BBP
S1_RRP5
MOEP19
PCB_OB
HutF_N
KH_PNO1_2nd
NorB_cytochrome_c-like
Motif
Other DBs
NCBI-ProteinID:
AHW59108
UniProt:
X5D8N7
LinkDB
All DBs
Position
1140275..1142566
Genome browser
AA seq
763 aa
AA seq
DB search
MVNATVKTIELADGRTITIETGKLAKQADGSVVVRMGDTMLLATVVSAKEAKEDVDFMPV
SVDYREKFSAAGRFPGGFLKREARPSDEEILVARLVDRALRPLFPEDYHAETAVMISLIS
SGKDEMPDCLAGLAASAAIAVSDVPFTTPISEVRVARIDGEFVINPSLEMLAQADLDIMV
GASYENIMMVEGEMNEVSEEVMLEAIKIAHEEIKKHCKVQEELAAELGVVKREYCHENNN
EELRAQVKADLYEKAYAIAKQQITNKSLRMESFAAVVDEYVAAYLEANAENEEIDLVANE
KLIRRYYHDVEKEAMRRMILDDAIRLDGRKTNEIRPIWGEVDYLPGAHGSSIFTRGETQS
LTSVTLGTKMDEKIIDQVTVQGKEKFLLHYNFPPFCVGDPKTPRGTSRREIGHGNLAHRA
LKKMLPADSPYVVRIVSDILESNGSSSMATVCAGTMGLMDCGLKIKKPVSGIAMGLITDK
GAEKYAVLSDILGDEDHLGDMDFKVTGTADGITATQMDIKVDGLPYEVLAQALQQAKEGR
LHILGEMLKVIPEVREDFKPNVPRIETVQIPKDMIGAVIGPGGKVIQAIQEETQTVIVIE
EVDDAGLVQISGAGLEPIEAAKAKIKAITALPEVGEIYQGKVKSVVSFGAFIEIIPGKEG
LLHVSEMAWERVENAEDFAKEGEIVEVKLIGVDEKTGKLKLSRKVLLPKPEGYVERPPRE
NRGPRGDNRGGDRRRDDRRGGDRRRDDRRGGDRREFRPRRDND
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacgctacagttaaaacaatcgaacttgccgatggcaggacgattaccattgaa
accggaaaattggcaaaacaagccgatggctcggtagtggttcgaatgggtgacaccatg
ttgctggcaacagttgtgtcggcaaaagaagcgaaagaagatgtagatttcatgccggta
tcagttgattaccgcgaaaaattttcagccgcaggacgtttcccgggaggtttcctgaaa
agagaagcccgtccgagcgatgaagaaattttggttgcacgtttagttgaccgagcactt
cgtccactattcccggaagattaccacgctgaaaccgcggtaatgatctcactgatctca
tcaggaaaagatgaaatgcccgactgtttagccggtttggcagcatcagcagcaatcgct
gtttcagatgttcctttcactactccgatctcggaagttcgcgtagcccgtattgatggc
gaattcgttatcaacccgtcactggaaatgttagcacaagccgatcttgacattatggtt
ggtgcatcgtacgaaaacattatgatggttgaaggcgaaatgaatgaagtttcggaagaa
gtaatgttggaagcgatcaaaattgcgcacgaagaaattaaaaagcactgtaaagttcag
gaagaactggctgcagaactgggagttgtaaaacgtgaatattgccacgaaaacaacaac
gaagaattgcgtgctcaggttaaagccgatctttacgaaaaagcatacgctattgcgaaa
caacaaattaccaacaaaagcctgcgtatggagtcttttgctgctgttgttgacgaatat
gttgcagcttaccttgaggctaatgccgaaaatgaggagattgaccttgtggccaacgaa
aaactcattcgccgttactaccacgatgtggaaaaagaagccatgcgccgcatgattctc
gacgatgcaattcgtttagatggccgtaaaacgaacgaaatccgtcctatctggggcgag
gttgattaccttcccggtgcacacggatcatcaattttcacccgtggcgaaactcaatcg
ttaacttcggttacattgggtaccaaaatggatgagaaaattatcgaccaggtaactgtt
cagggaaaagagaagtttttgttacactacaacttccctccattctgtgttggcgaccct
aaaacgccacgcggaaccagccgtcgcgagatcggtcacggaaaccttgcacaccgcgca
ttaaagaaaatgcttcctgccgattcaccttatgtagttcgtattgtttctgatattctg
gaatcaaacggatcatcatcgatggcaactgtttgtgccggaacaatgggattgatggac
tgcggattaaaaatcaaaaaaccggtatcgggtatcgcaatgggattgattaccgataaa
ggtgctgaaaaatacgccgttctttctgacattttaggtgacgaagaccacctgggcgac
atggactttaaagtaaccggtactgccgatggtattaccgctactcaaatggatattaaa
gttgacggactgccatacgaagtgcttgcacaagcattgcaacaggcaaaagaaggccgt
ttacacattttgggcgaaatgctgaaagtgattcctgaagtacgcgaagactttaaaccg
aatgttccacgtatcgaaaccgttcagattccgaaagatatgatcggtgcggtaatcgga
cctggtggaaaagtgattcaggctatccaggaagaaactcaaaccgtaatcgttatcgaa
gaagttgacgatgcaggtttggttcagatttcaggagccggactggagccaattgaagct
gcaaaagctaaaattaaggcaatcactgcacttcctgaagtgggtgaaatttaccaggga
aaagtaaaatcggtagtttctttcggagcatttatcgagattattcctggaaaagaaggt
ctgttgcacgtatcggaaatggcttgggaacgcgttgaaaacgcagaagactttgccaaa
gaaggcgagattgttgaagttaaactgatcggtgttgacgaaaaaaccggcaaactgaaa
ctttcgcgcaaagtgttgttgccaaaacctgaaggttatgtagagcgcccgccaagagaa
aaccgcggacctcgtggagataaccgtggtggtgatcgtcgacgcgatgatcgcagaggt
ggagacagaagacgtgatgaccgcagaggtggagatcgcagagaattccgtcctcgtcgc
gataacgactaa
DBGET
integrated database retrieval system
