Draconibacterium orientale: FH5T_06445
Help
Entry
FH5T_06445 CDS
T03072
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dori
Draconibacterium orientale
Pathway
dori03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dori00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH5T_06445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dori03019
]
FH5T_06445
03009 Ribosome biogenesis [BR:
dori03009
]
FH5T_06445
Enzymes [BR:
dori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FH5T_06445
Messenger RNA biogenesis [BR:
dori03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FH5T_06445
Ribosome biogenesis [BR:
dori03009
]
Prokaryotic type
rRNA helicases
FH5T_06445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AHW59356
UniProt:
X5DYI2
LinkDB
All DBs
Position
complement(1541584..1543305)
Genome browser
AA seq
573 aa
AA seq
DB search
MSLFETMGLKAEILGAIQELGFENPTPVQEQTIPFLLNSDQDMVALAQTGTGKTAAFGLP
IVQQFDTSVKVPQALILSPTRELALQIAKDLENFSKNINGAKIATLYGGSDIRKQIKDLE
NGAQIVVGTPGRTLDLIKRSKLKVQDIKWVVLDEADEMLSMGFKDDLDAILKDTPVEKQT
LLFSATMPKEIVRIANTYMADPHEISVGKKNTAAENVEHNYYLVHAKDRYIALKRVADIN
PNIYGIIFCRTRAETKDVADKLMQDGYNADALHGDLSQAQRDHVMSRFRSKHLQMLVATD
VAARGLDVNELTHVINYNLPDDPEVYIHRSGRTGRAGKKGISITLIHLREKGKLRDVEKK
MGKKFIKVPVPLGKEICEKQLFNLIDRVEKVEVNDENIAEFMPVIYKKLAWLEREELIKH
FVSVEFNRFLQYYENAKDINVDEAREKESMRNERGDRRRGGRDGRERGDRGNRERGGDRE
RGDRGRARRGNGGNMSRFFFSLGKKSGVNKRAIIDLINQNTPGKSIDIGSIEVLKGFSFF
EIDSNYEKEITKAFKNARFRGQKVNIEVANKKK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttgaaacaatggggttaaaagccgaaatccttggtgcgatccaggagctt
ggttttgagaatcccacgccggttcaggaacaaacgattccgtttttactgaacagcgac
caggacatggttgccttggcacaaacaggaacgggaaaaacagcggcatttggcttacct
attgttcagcagttcgacacgtcggtaaaagtaccgcaggccttaatattaagtccaacg
cgcgaactggctttgcaaattgcaaaagacctcgagaatttctcgaaaaacattaacgga
gcaaaaattgccactttatatggcggttccgacatcagaaaacagataaaagaccttgag
aatggcgcccagattgtggtgggaactccgggacgtacgctcgatctgataaaaaggagc
aagttaaaagtacaggatataaagtgggtggtgctcgacgaagccgacgaaatgctttcg
atgggtttcaaggacgaccttgatgccattttgaaagatacaccggttgaaaagcaaact
ttactgttttcggctaccatgccgaaagagattgtacgaattgccaatacttacatggcc
gatccacacgaaatttcggtgggcaaaaagaacaccgctgccgaaaacgtagagcacaac
tattacctggtgcacgccaaagaccgttatatcgcactgaaacgtgtggccgatatcaat
ccgaatatttacggaattattttctgccgtacacgtgctgaaactaaagatgtggccgac
aaactaatgcaggacggatacaatgccgatgcactgcacggcgacctgtcgcaggcacag
cgcgatcacgtaatgtcgcgtttccgcagcaaacacctgcaaatgctggtggctaccgat
gtggctgcacgtggtttggacgtgaacgaactgacccacgttattaactacaacctgccc
gacgaccctgaggtatatattcaccgaagcggaagaacaggacgtgccggtaaaaaaggt
atttccattaccctgattcacttgcgcgaaaaagggaagctgcgcgatgtggagaagaaa
atgggcaaaaagttcattaaggttccggtaccactgggaaaagaaatttgcgagaagcaa
ctttttaacctcatcgaccgcgtagaaaaagtggaagtaaacgacgagaacattgcggag
tttatgccggttatttacaaaaagctggcctggttggaacgcgaagagctgatcaaacac
tttgtttcggtagagtttaaccgctttttacaatactacgaaaacgcaaaggatattaac
gttgacgaggcacgcgaaaaagaatcgatgcgtaacgagcgtggcgaccgccgcagaggt
ggacgcgacggacgtgagcgtggtgaccgtggaaaccgcgagcgcggcggagaccgtgaa
cgcggagatcgtggcagagcacgaagaggaaacggtggcaatatgtcgcgattcttcttt
agcctgggtaaaaagagcggcgttaacaaacgtgcaattatcgatttgattaaccagaac
accccgggaaaaagtatcgatattggcagcattgaagtgctgaaaggtttctcgttcttc
gagatcgactcgaactacgagaaagaaattacaaaagctttcaaaaatgcccgcttcaga
ggccagaaagtgaatattgaagtagccaataaaaagaagtag
DBGET
integrated database retrieval system
