Draconibacterium orientale: FH5T_18790
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Entry
FH5T_18790 CDS
T03072
Name
(GenBank) DEAD/DEAH box helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
dori
Draconibacterium orientale
Brite
KEGG Orthology (KO) [BR:
dori00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dori03019
]
FH5T_18790
Enzymes [BR:
dori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FH5T_18790
Messenger RNA biogenesis [BR:
dori03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FH5T_18790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
ResIII
AAA_22
nSTAND3
AAA_19
HA2_C
AAA_30
Flavi_DEAD
UvrD-helicase
AAA_11
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
AHW60989
UniProt:
X5DIP8
LinkDB
All DBs
Position
complement(4397892..4400381)
Genome browser
AA seq
829 aa
AA seq
DB search
MSFDPHTTNLPIVDVIHEVKQHLQEENTLIVHAPPGAGKSTVIPLVLLEECWLKGQKIIM
LEPRRLAAKTIATRLAELLGEPVGKRVGYRIRFDNCVCESTQLEVVTEGILTRMLQSDNA
LEGIGMVIFDEFHERSLFADVALALSREAQQILRPDLRIMIMSATLNMPQLTQLLSAPSV
VSEGRQYPVEIHYEGDNDLKLLPELTSRVITKAVEKHDGDILVFLPGEGEIKNTEAILRN
KHKGIAIHPLYGQLPPHKQFAAIMPSRDGRRKIILATSIAETSLTIEGVKVVVDCGFSRT
LKFNPNTGLSRLETAEITLDSADQRAGRAGRLGPGVCYRMWTKATHHRLNKHRTPEIEEA
DLASLVLEMAKWGVDDINKLTWLTPPPKGHVLQANELLEQLDAIADGTITAHGKAIHHLP
CHPRLAHMLLLAQNDNFTALACDIAAILEERDPLNRDAGIDINLRIEALRRYRTGTLKNK
RLKHIAKISAQYQKMLNIDEDNSTTDPFETGLLLAYAYPQRIAHATPGNNAQFKLANGNI
AAAGHEDDLAHEDWLSIASVNARDGVGRIFLASPLNPRDLAPMVKTVESISWDTKRGGFS
AFSELRIGSIILQQKPLQNYNIDQKIKAISDVLKKEGAWLLDFNQEVEQWQNRINSLRLW
DASNNWPDVSTSHLLATNYEWLSPYLNEVKKPEDLKKIDLKKVLQNYLPYELQQLLDKLA
PERLQVPSGSNIKLKYASNGESPILAVRLQEVFGLLDTPTVNNGKVKILLHLLSPGFKPV
QVTDDLNSFWNTTYFEVKKELKARYPKHHWPDNPLEAEPVRGVKRKNNS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttcgatccacatactaccaatttacccatcgttgatgtaatccacgaggtaaag
cagcaccttcaagaagaaaataccttaatcgtacacgcacctcccggagccggaaaaagc
accgttattccacttgtactattggaagaatgctggctaaaaggacaaaaaattatcatg
cttgaaccgcgccgtctggctgccaaaactattgctacccgcctggccgaacttttaggt
gagccggtgggaaaacgggttggttaccgcattcgttttgataactgtgtatgcgaatcc
acccaattggaagtagttaccgagggcattttaacgcgtatgctgcaaagcgacaatgca
ttggaaggcataggcatggttattttcgatgagtttcacgagcgcagtctctttgccgat
gtagctttggcgctttcgcgcgaggcacagcagattttacgccctgatttgcgcatcatg
attatgtcggcaacactaaatatgccacaacttacacagctgcttagtgcaccgtcggtg
gttagtgaaggacgtcagtatcctgttgaaattcattatgaaggcgataacgacctaaag
cttcttcctgaattaaccagccgcgtaattacaaaagcagttgaaaaacatgatggcgat
attctggtgtttcttcccggcgaaggagaaataaaaaacaccgaagcaattcttcgaaat
aaacacaaaggaattgctattcatccgctctacggacagctaccgccacacaaacagttt
gccgcaataatgcccagccgcgatggacggcgtaaaattattcttgctacatccatcgcc
gagaccagcttaaccattgaaggcgtaaaagttgttgttgactgcggttttagccgtacg
ctgaaattcaatcccaacacaggattgtcgcgacttgaaacggcagaaataaccttggat
tcggccgatcagcgggccggacgagcaggccggcttggccccggcgtttgttatcgcatg
tggacaaaagcaacgcatcatcgcctgaataaacaccgcacaccggaaattgaagaagct
gatctggcctcgctggtacttgaaatggccaaatggggagttgacgatattaataaattg
acctggctcactcccccgccaaaaggtcacgttctgcaagctaatgaattgctggaacaa
ctggatgccatcgctgatggaacaattacagcgcacggaaaagcaattcatcatctgcct
tgtcatccccgactggcacacatgttacttctggcacaaaacgataattttacagcactg
gcctgcgatattgcggccattttggaagaacgcgatccgttgaaccgcgatgccggaata
gacataaatttacgtattgaagctttgcgccgttaccgtaccggaacattaaaaaacaaa
cggttgaaacacattgcaaaaatttctgcgcaataccagaaaatgctcaatattgatgaa
gacaattcaactactgatccgtttgaaaccggtttattgctggcttatgcctaccctcaa
cgcattgctcacgccactcccggcaacaatgcccaatttaaactggctaacggaaatatt
gcggctgccgggcacgaagacgacctggcgcatgaagactggctgtcgatcgcaagtgta
aatgcccgcgatggagttggccgtatatttctggcatcgccactaaatcctcgtgatctt
gctccgatggttaaaacggttgaatccatcagctgggatacaaaaagaggcggtttttct
gctttttcggaattacgaattggcagcattattcttcaacaaaaaccattgcaaaactat
aatatcgaccagaaaataaaggcgatttctgatgtcctaaaaaaagaaggtgcctggctg
ctcgattttaatcaggaagtggaacaatggcaaaaccgcatcaatagtttacgattatgg
gatgcatcaaataattggcccgatgttagtacaagtcatcttcttgccacaaactacgaa
tggctttcgccttaccttaacgaggtaaaaaagccggaagacctgaaaaaaatcgatttg
aaaaaagtgctgcaaaattatctgccttacgaattgcagcaactattggataagctcgca
ccggagcggctgcaggttcccagcggatcgaacattaagcttaaatatgcttcaaacggc
gaatcaccgattttggccgttcgcttacaggaagtatttggtttgctcgacacgccaacc
gttaacaatggaaaggtaaaaattctgctgcatcttctgtcgccaggctttaagcctgtt
caggtaaccgatgatttgaacagcttttggaatactacctatttcgaagtaaaaaaggaa
ttgaaagcacggtatccgaaacaccactggccggataatccgttggaagctgagccggtg
cgtggtgtaaaacggaaaaacaactcataa
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