Draconibacterium orientale: FH5T_20710
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Entry
FH5T_20710 CDS
T03072
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dori
Draconibacterium orientale
Pathway
dori03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dori00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH5T_20710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dori03019
]
FH5T_20710
Enzymes [BR:
dori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FH5T_20710
Messenger RNA biogenesis [BR:
dori03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FH5T_20710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AHW61215
UniProt:
X5E156
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All DBs
Position
4821246..4822487
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AA seq
413 aa
AA seq
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MKFEDYSISNTIKTNLEKKGFRRPTDIQFKAIPPVLRGEDVLAIAQTGTGKTAAFAIPVI
HNIQQAKLNQHIQGISCLVMVPTHELAKQINEVFVSISKNTGVKTTVIIGGVDQDPQIDR
LKTGTDVLVATPGRLFDLVSQGHLKLHGVKTLILDEADHMLDLGFIKDINDLIRFLPEKR
QTLFFSATINKKIKKLAYSLVSKPIRIQISPKNPVAKTIEHQVAFIEMDDKRAFLERLVG
ENPEAKILAFVRTKVRAERVKKAMERVEIESDTIHSDKEQAERDQTMQRFKSGALKLLIA
TDVSARGIDIPNVDFVVNYDLPEVAENYVHRVGRTGRGNQKGKAVSFCSEEEREILDEIE
SFLGKDIHRLEIDKNLYKETLDFTKDTDYNWQKLMRENERELKEVKKKKKKKK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgaggattattccatatccaacaccataaaaaccaacctggaaaaaaaggga
ttccgtcgtccaaccgacattcagtttaaggccattccgccagtgttaaggggcgaagat
gttttggccattgcccaaaccggaaccggaaaaacggcggcttttgccattccggtaatt
cataatattcagcaggccaagctgaatcaacatattcagggaattagttgtttggttatg
gttccaacgcacgagctggccaagcaaatcaacgaagtgtttgtttccatttcaaaaaat
acgggggtaaaaaccactgtaataattggtggggttgatcaggatcctcaaatcgaccgc
ttaaaaaccggtaccgatgttttggttgctacacccggtcgcttgttcgacttggtaagc
cagggacacttaaaactgcacggggtaaaaacactgattctggatgaagccgatcacatg
ctcgatcttggttttattaaagatattaacgacctgatacggtttttacccgaaaaacgc
cagaccttattcttctcggcaaccatcaataaaaagattaaaaagcttgcctattcgctg
gtaagcaaacctatacgcattcagatatcgcccaaaaacccggtggcaaaaaccatcgag
caccaggtggcatttatcgaaatggatgacaaaagagctttcctggaacgccttgtggga
gaaaatccggaggcaaagattctggcatttgtacgaacaaaagtacgtgccgagcgcgtg
aaaaaagcaatggaacgtgttgaaattgaaagcgacaccattcacagcgataaagaacag
gcagagcgcgaccaaaccatgcaacgatttaaaagcggcgcgcttaaattacttatcgct
accgatgtaagtgcccgcggaattgatatccccaacgttgattttgtggtgaattacgac
ctgcctgaagttgccgaaaactacgttcaccgcgtaggacgaacagggcgcggcaaccaa
aaaggaaaagccgtttcgttttgcagtgaagaagaacgtgaaattctggatgaaattgaa
agctttttaggcaaagacattcatcgccttgagatcgacaaaaacctttacaaagaaaca
cttgattttaccaaagacaccgactacaactggcaaaagctaatgcgcgaaaacgagcgc
gaattaaaagaggtgaaaaagaagaagaaaaagaaaaagtaa
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