Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0184900
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Entry
Os01g0184900 CDS
T02163
Name
(GenBank) Similar to SSRP1 protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os01g0184900
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os01g0184900
Transcription factors [BR:
dosa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
Os01g0184900
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
Os01g0184900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
Motif
Other DBs
NCBI-ProteinID:
BAF04151
RAP-DB:
Os01g0184900
UniProt:
Q9LGR0
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Position
1
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AA seq
641 aa
AA seq
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MTDGHLFNNILLGGRAGSNPGQFKVYSGGLAWKRQGGGKTIEIEKSDLTSVTWMKVPRAY
QLGVRTKDGLFYKFIGFREQDVSSLTNFMQKNMGLSPDEKQLSVSGQNWGGIDINGNMLT
FMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFL
GDENRTAAQVLWETIMGVADVDSSEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTFVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNLALTK
EVLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNI
QRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAGDEES
DEEDEDFVADKDDSGSPTDDSGGEDSDASESGGEKEKLSKKEASSSKPPVKRKPKGRDEE
GSDKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKMTGE
EKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccatctcttcaacaacatcctcctcggcggccgcgccggctcgaatcct
ggccagtttaaagtgtattctggaggtcttgcatggaagagacagggtggaggaaagacc
attgagattgagaaatctgatttaacgtcggtgacatggatgaaagtccccagggcctat
cagcttggagtcaggaccaaagatggcctgttttacaagtttattggcttccgtgaacag
gatgtaagcagtctgaccaatttcatgcaaaagaatatgggcctctcaccagatgaaaaa
cagctttctgttagtggtcaaaactggggagggatcgatataaatggaaatatgcttacc
tttatggttggttcaaagcaagcatttgaagtgtcgctggcagatgtctcacaaacacaa
atgcaaggcaaaacagatgttctcttagagtttcatgttgatgatactactgggggcaat
gagaaagattcgcttatggatttaagctttcatgtacctacttcaaatactcagtttctt
ggagatgagaatcgcactgcagcccaggtcctatgggaaacaataatgggtgttgctgat
gttgattcttctgaagaggcagttgtcacctttgaaggaattgctattcttacaccaaga
ggacgttatagtgttgagcttcatctgtcatttttgcgtctccaaggacaagctaatgat
tttaaaatccaatatagcagcattgttcgcctttttcttttgccaaagtcaaacaaccct
catacatttgtggttgtcactcttgatccaccaatccgtaaaggacaaacactgtatcct
cacattgtcattcagtttgagacagaggcagtagttgaaagaaatctggcattaactaaa
gaggttctggctgaaaaatacaaggacaggctggaggaatcttacaagggtctgatacat
gaggtattcaccaaagttcttcgtggtctatctggtgctaaagttacaaggccaggttct
ttcagaagttgccaagatgggtatgcagttaaatcgtctctcaaagctgaagatggactg
ttgtatccacttgaaaagggcttcttctttctgccaaagcctcccaccctcattctacat
gaagagattgagtttgttgaatttgaacgtcatggtgctgggggtgccagtatttcatca
cactatttcgacctcctagtcaagctgaaaaatgatcaagaacatctcttcagaaatatt
caaaggagtgaataccataacctcttcaactttatcaatggaaaacacttgaaaataatg
aaccttggagatggtcaaggcgcaactggtggggttacagctgttctacgagacactgat
gatgatgctgttgatccacatctagaacgaattaaaaatcaggctggggatgaggaaagt
gatgaagaggatgaagattttgttgcggataaggatgatagtggatcacctactgatgat
tctggtggggaggattcagatgctagtgaaagtgggggtgaaaaagagaaattatccaaa
aaggaagctagtagttcaaagccacctgtgaagaggaagcctaagggaagggatgaagaa
ggttcagacaaaagaaagccgaagaagaaaaaggatcctaatgcccccaaaagagcaatg
acaccattcatgtacttctcaatggctgagcgaggaaatatgaagaataacaatcctgat
ttgcctacaaccgagattgcaaagaagctcggggagatgtggcaaaagatgacaggcgaa
gagaagcaaccttacatccaacagtctcaagtcgacaagaaacgatacgagaaggaatct
gctgtctaccgtggcgcagccgccatggacgtggactctggctccggcggcaacgagtct
gactag
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