Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0212100
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Entry
Os01g0212100 CDS
T02163
Name
(GenBank) ATP-dependent helicase, DEAH-box family protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os01g0212100
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Os01g0212100
Spliceosome [BR:
dosa03041
]
Complex C
Other components
Complex C specific factors
Os01g0212100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
WHD_HA2
DEAD
AAA_30
AAA_19
AAA_29
AAA_7
T2SSE
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAF04291
RAP-DB:
Os01g0212100
UniProt:
A0A0P0V008
LinkDB
All DBs
Position
1
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AA seq
700 aa
AA seq
DB search
MSRFWRPGSEKPTAAIVEDEEGGVLFLPTSTSSSSSSGFGYASLERQRQRLPVYKYRKAI
LYLVERHATTIVVGETGSGKSTQIPQYLKEAGWAEGGRLIGCTQPRRLAVQSVASRVAEE
VGVRLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDPLLTKYSVIMVDEAHERSI
STDMLLGLLKKIQRRRPDLRLIISSATIEARSMSTFFNIRRKNSMLESADHLPNPEPAIL
SVEGKGYTVEIHYVEEPVSDYLQAAVNTVLIIHEKEPPGDILVFLTGQDDIDAAVKMLNE
EIQHRGRHYLDLLILPLYSGLPRGDQDLIFTPTSKGKRKVVISTNIAETSLTLEGVVYVV
DSGFSKQKCYNPISDIESLVVAPISKASARQRAGRAGRVRPGKCFRLYTEEFYLKEMQPE
GIPEMQRSNLVSCITQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLGILDEDAKLTV
PLGFQVAEIPLDPMISKMILSANNFGCSDEILTIAAFLSVQSVWVSMRGVKKEFDEAKLR
FAAAEGDHVTFLNIYKGFHQSGKSSQWCYKNFLNHQALKKVIDIREQLVRIIKRFGIPLT
SCDRDMEAVRKAIIAGAFAYACHLEEYSQNGMYKTIRTSQEVYIHPSSVLFRVNPKWVIY
QSLVSTDKHYMRNVIAIEPSWLTEAAPHFYQFRTPNPALH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggttctggaggccggggtcggagaagccgacggcggcgatcgtcgaggacgag
gagggcggcgtcctcttcctgcccacaagcaccagctcctcctcctcatccgggtttggg
tacgcgagcttggagcggcagcggcagcggctgccggtgtacaagtaccggaaggccatc
ctctacctggtggagcggcacgccacgaccatcgtcgtcggcgagaccggcagcggaaag
tccacgcagatccctcagtaccttaaagaggctggatgggccgagggtggtcgacttata
ggctgcactcaaccaagacgattggccgtgcagtcagttgcatcaagagtagcggaagaa
gtaggtgtgagactcggagaagaagttggttacacaatccgatttgaggatcaaacaaat
ccaggtatgaccatgattaaatttctgacagatggggtattgatcagagaaatgatggaa
gatcctcttctgaccaagtatagtgtaattatggttgatgaagcccatgaacgatccatt
tcaactgacatgttgctgggtcttctgaaaaagattcaacgacgtcggcccgacttgcgt
ctaatcatatcctctgcaacaattgaagcaagatccatgtcaacttttttcaacattagg
cgaaagaattctatgcttgagtctgctgatcatttgcccaacccagaacctgctattctt
tctgtggaaggtaaaggttacacagtggaaatccattatgttgaagaacctgtttcagac
tacttacaggctgctgtgaatactgtacttattattcacgaaaaggaaccaccaggggat
attttggtatttttaactggccaggatgacatagacgcagctgttaagatgctaaatgaa
gaaattcaacaccgtggaagacattatttagacctgctgattctgcccttgtactctggc
cttccgcggggagatcaagacctcatttttactccaacttcaaaaggtaaaaggaaggtt
gtgatatcaacaaacattgctgagacgtcattaactctagagggcgtggtgtatgttgtt
gatagtgggttttccaagcagaagtgttacaatccgatttctgatatcgagagtttagtt
gtcgcaccaatatccaaggcatccgcaagacaaagagcaggccgagctggaagggtgcga
ccaggaaagtgctttaggctttatacagaggaattttaccttaaagaaatgcagccagaa
gggattcctgaaatgcaaaggtctaaccttgtttcctgcataacacagttgaaagctcta
ggaatagacaacattttgggatttgattggccagcttctccatcaccagaggcaatgatt
cgagctcttgaagttctatattccctgggaatccttgatgaagatgccaaactaacagta
ccccttggcttccaagttgctgagatccctctggaccctatgatttcaaaaatgatcctt
tcagccaataatttcggatgctctgatgagatattgaccatagcagcatttctatctgtt
caatctgtgtgggtttccatgagaggagtgaaaaaagagtttgatgaagctaagctccgt
tttgctgctgctgagggagatcatgtgacgttcctgaatatctacaaaggatttcatcaa
tctggaaaatctagtcagtggtgttacaagaactttttgaaccaccaagcattgaagaag
gttattgacatcagggagcagcttgtcaggattatcaagaggtttggcataccactaaca
tcatgtgatagagatatggaggcagtaagaaaagctattattgctggtgcatttgcttat
gcatgccatctagaggaatacagccagaatgggatgtacaaaacaataaggacctcacaa
gaagtttatattcatccttcttctgtgctatttagggttaatccaaagtgggtcatctac
cagtctctagtttcaactgataagcactatatgcgtaatgttattgccattgaaccatca
tggcttacggaagctgcaccacatttttatcagttccggacacccaatcctgcccttcac
taa
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