Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0232300
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Entry
Os01g0232300 CDS
T02163
Name
(GenBank) Similar to Zinc phosphodiesterase ELAC protein 1 (EC 3.1.26.11) (Ribonuclease Z 1) (RNase Z 1) (tRNase Z 1) (tRNA 3 endonuclease 1) (ElaC homolog protein 1). Splice isoform 2
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dosa03016
]
Os01g0232300
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Os01g0232300
Transfer RNA biogenesis [BR:
dosa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Os01g0232300
Prokaryotic type
Os01g0232300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BAF04416
RAP-DB:
Os01g0232300
UniProt:
Q0JPB2
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All DBs
Position
1
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AA seq
537 aa
AA seq
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MGLFPPMCSKNMEIPILKGSARISSRLHFVCPHLFPSSGFWPVEPINDVDSEKNKVSSLQ
ACESVSAANLLKFHLRPYAQLGLDRSSIPSLTTYGDIVDELLSEIPEIKEVPEQISKFWQ
SNSVGKHMLMVEEPWITENSSVCNFVDENSNSGKLQDGTPLRASGWRKHPKDTPDIPCCV
ENATREDMEITFLGTGSSQPSKYRNVSSIYINLFTQGGILLDCGEGTLGQLKRRFGVSGA
DDAVKSLKCIWISHIHADHHTGVARVLALRSKLLKGVPHKPLLVIGPRPLERFLNAYSTL
EDLDMQFLDCRQTLKPSIEAFLSDNATESATSQLGSTIFAPGSKMENYSRKPASPRDTTA
LTNLKDVLHESGLEVLYSVPVLHCPQAFGVVLRAKEKVSSAGKAIPGWKVVYSGDTRPCP
ALVDASRDATVLIHEATFEDSMKDEAIARNHSTTKEAIAVGTSAGAYRIILTHFSQRYPK
IPVFDEVDMQKTCIAFDLMSVNLADLPVLPKVLPHLKLLFKDEMVVDESDEIQEAVM
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggactttttcctcctatgtgcagtaaaaacatggaaattcctatcctgaagggtagt
gcaaggatatcatcacgtcttcattttgtatgccctcatctcttcccatcctctggattt
tggcctgtggaacctataaatgatgttgattcagagaagaataaggtttcttcattgcaa
gcctgtgaaagtgtgtcagcggctaatcttctaaagtttcatctgcgtccatatgctcaa
ctggggctggacagatcgtctataccaagccttactacttatggagatattgtagatgag
ctcttgtcggagatcccagagattaaagaagttcctgaacagattagcaagttctggcaa
agtaattcagttggcaagcatatgctcatggttgaagagccatggattactgagaattcc
tctgtttgtaattttgtagacgaaaatagtaattcaggtaagttacaagatggcactcca
ttgagagcaagtggctggagaaagcacccaaaggacactcctgatatcccttgctgtgtg
gagaatgcaacaagagaagatatggaaattacctttttgggtacgggttcatcccaacct
tcaaaatatcggaacgtaagttccatatatattaacctgtttacacaaggaggtatactt
cttgattgcggtgaaggaaccttagggcaattgaaaagaaggtttggtgtaagtggtgct
gatgatgctgtgaaaagtttgaagtgtatttggatttcccatattcatgctgatcaccac
acaggtgtagctagagttcttgctttgaggtctaaattgttaaaaggggtacctcacaag
cccttacttgttattggaccaagaccacttgaaagatttctaaatgcatattcaacactc
gaagatcttgatatgcagttcctagactgcaggcagactttaaagcctagtatagaggct
tttctcagtgacaatgctactgaatctgccacatctcaacttggaagcactatatttgct
cctggaagtaaaatggagaactacagccggaagcctgcaagtccaagagatactacagct
ctaactaatttgaaagatgtcctacatgaatcaggtttggaagttctttacagtgtccca
gttctgcactgtccacaggcgtttggagttgttctgagagccaaggagaaggtgagcagt
gctggaaaagctattccaggatggaaggttgtttattcaggtgacacgaggccctgccca
gctcttgtagatgcgtccagagatgccactgtactaatacatgaggcaacatttgaggac
agtatgaaggatgaggcgatcgctaggaaccatagtacaacaaaggaggccatagcagta
ggcacatcagccggagcataccgtataatcttgacccactttagccaaagataccctaaa
atcccagtttttgatgaggttgatatgcaaaagacttgcattgcgttcgacctgatgagt
gtgaatctggcggacttgccagtactgccaaaggttcttcctcacctgaagctcttgttc
aaagatgagatggtggttgacgaatctgatgagatccaggaggctgttatgtag
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