KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0265800
Entry
Os01g0265800      CDS       T02163                                 
Name
(GenBank) Similar to Sulfated surface glycoprotein 185 precursor (SSG 185)
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os01g0265800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os01g0265800
   03041 Spliceosome [BR:dosa03041]
    Os01g0265800
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     Os01g0265800
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     Os01g0265800
Spliceosome [BR:dosa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    Os01g0265800
SSDB
Motif
Pfam: RRM_1 RRM_7 CSTF2_hinge
Other DBs
NCBI-ProteinID: BAF04586
RAP-DB: Os01g0265800
UniProt: Q9LJ04
LinkDB
Position
1
AA seq 524 aa
EPQTPHHTAPLSPPLHSRRNPSPKVPPRLALAVAMGKKRKLDSKSPAAARSAAARAAAAA
AAAAAAAAVAEPSSQPEALAEDPAPSSQPLGLSSEGAGERMMSREAGGGEEEEVEEVEVE
EEVEVDEDEDGEGEGEEEEEAAERDADSIQALLNSFPKDQLVELLSAAALSHEDVLTAVH
RAADADPALRKIFVHGLGWDATAETLTEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSR
RSGARAALREPQKKIGNRTTACQLASVGPVPPGGMATNPAPAVAPAPAQLALPPVSEYTQ
RKIFVSNVGADIDPQKLLQFFSKYGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQ
EPHKQFEGVVLHCQKAIDGPKPNKGGGLGGLYGAGTSGGRKGAGGYGAHSHSLPGAAVGG
HVMPSPVSSLTSLPGVAGGPGVNPALGQALTAILASQGGGLGLNNILGVGANGSGLPNPG
ASAGLGSSGLPGMPGAGGYLGGYGGGGGYGSTPPGGPGRNYMGH
NT seq 1575 nt   +upstreamnt  +downstreamnt
gagccccagactccacaccacacagcccccctttcccctcccctccacagccgtcgaaac
cctagccccaaggttcccccacgcctcgcgctcgccgtcgccatgggcaagaagcggaag
ctcgattccaaatcccccgccgccgctaggtccgcagccgccagggccgcagcagccgca
gccgccgccgccgccgccgccgccgtcgccgagccctcctcccagcccgaagccctagcc
gaggacccggccccctcgtcgcagcccctgggcctatccagcgagggcgcgggggagagg
atgatgtcccgtgaggctggcggtggcgaggaagaggaggtggaggaggtcgaggtggag
gaggaggtggaggtcgacgaggacgaggatggggagggggagggggaggaggaggaggag
gcggcggagagggacgccgactcgatccaggcgctgctgaattcgttccccaaggaccag
ctcgttgagctgctcagcgccgcggcgctcagccacgaggacgtgctcacggccgtccac
cgcgcggccgacgccgacccggcgctgcggaagatcttcgtccacggcctcggctgggac
gccaccgcggagaccctcaccgaggcgttcagcgcctacggcgagatcgaggacctcagg
gtcgtcaccgaccgcgccacgggcaagtgcaagggctacggtttcatcctcttcagccgc
cggtccggcgcccgcgcggcgctccgtgagccccagaagaagattggcaaccgcaccacg
gcctgccagctcgcctctgttggtcctgtgccgccgggcggcatggccactaaccctgcc
ccagcggtagccccagccccagcgcagctggcattgccgccagtgtcggagtacacgcag
cggaaaatttttgtcagcaatgtcggcgcagacatagacccgcagaaactgctgcagttc
ttttcaaagtatggtgagattgaggagggtcctcttgggctcgataaggttaccgggaag
ccgaagggctttgctctatttgtctacaagaccctcgatagtgctaagaaagcgcttcag
gagccacacaagcaattcgagggggttgtgctgcactgccagaaggcaattgatggacca
aagcccaacaaaggtggaggacttgggggtttgtatggtgctggcacttcaggcgggagg
aaaggcgctggtggttatggagctcatagtcattctttgcctggtgctgctgttgggggc
catgtgatgccatctccagtatccagtttgacttcattgccaggtgtagctggtggccca
ggggtgaatcctgctctggggcaggccttgacagctatccttgcctcccagggtggaggg
ttgggtctgaacaacatcctgggagttggtgcaaatggttcagggttgcctaacccaggg
gcttctgcaggactgggtagtagtggtttgcctgggatgcctggtgctggtggttatttg
ggcggctatgggggtggtggtgggtatggcagtactccaccaggaggcccaggaagaaat
tacatgggtcattag

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