Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0275200
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Entry
Os01g0275200 CDS
T02163
Name
(GenBank) Argonaute and Dicer protein, PAZ domain containing protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os01g0275200
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os01g0275200
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Os01g0275200
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Os01g0275200
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
Os01g0275200
microRNA pathway
RISC loading complex
Os01g0275200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-ProteinID:
BAF04635
RAP-DB:
Os01g0275200
UniProt:
Q5NBN9
LinkDB
All DBs
Position
1
Genome browser
AA seq
619 aa
AA seq
DB search
MRAKCALKNLRIKTTHTGSEFRIIGLSEDTCYSQTFQIKRKNGNGGSDTVEEVTVFEYYR
KNWKIDLKGSAHFPCLNVGKPKRPTYIPLELCHLVPLQRYKKALSTLQRSTLVERSRQNP
QERMFVLSGVLRDSDYNSVPMLRECGISIAQEFTQVAARVLPAPKLKSGDGEDIFARNGR
WNFNKNRLIQPKRVQRWVVVNFSAQCNAHHLAQRLIHCGNLKGLPVDPEDHVFQERSHMG
RERAETRVNDMFQQLLSGDKPSFVLCVLPERKNCDIYGPWKRMCLVKYGIVTQCLAPTKI
NDQYLTNVLLKINAKLGGLNSLLQIERNQAIPLLSKTPTIILGMDVSHGSPGRDDVPSVA
AVVSSLEWPLISKYKASVCTQSPRLEMIDSLFKLVGNEDHVIIRDGVSEGQFNQVLNIEL
AQIIKACEFLANEKNDSEWSPKFTVIVAQKNHHTKFFQTDRSNKVVNVPPGTVVDKGICH
PRNCDFYMCAHAGMIGTTRPTHYHVLHDENNFTPDDLQELVHNLSYVYQRSTTAISGVAP
ICYAHLAAAQVSQFVRLDDAASEGSGDGGAPPRPVPELPRLHPDGGCLEMVYELAHLYDI
IISKIHILSIFLLASFSNY
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagagccaagtgtgcactgaagaacctgaggataaaaacgactcacaccggctctgaa
tttaggatcatcggtttgtctgaagacacttgctattcgcagacgttccaaataaagaga
aaaaatggcaacggtggctcggatacagtggaagaagtgacagtctttgaatactacagg
aagaattggaaaatagatttgaagggatctgctcactttccctgtctaaatgttgggaag
ccaaagcggccaacatatatcccattggagctttgccatttggtgccattgcaaaggtac
aaaaaggctttgtcgacgttacagcggtccacgttggttgagagatcaaggcagaatcct
caagagaggatgtttgtcttgtctggtgtgttgagggacagtgattataactctgtgcca
atgctgagggagtgtggcatttctatagctcaagaatttacccaggttgctgctagagtc
cttccggcaccaaagctgaaatctggagatggcgaagatatttttgcgcgcaatgggagg
tggaacttcaataaaaataggctcattcagcccaagagagtgcagagatgggtagttgtc
aatttttctgcgcagtgcaatgcccatcatcttgctcagcgtctcatccattgtgggaac
ttgaagggacttccagtagatcctgaagatcatgtgtttcaagagagatctcacatggga
cgcgagcgtgcggaaacaagggtgaatgacatgtttcagcagttgttgtctggcgacaag
ccctcttttgtgttgtgtgttctccctgagaggaagaactgtgacatctatggaccatgg
aagcgtatgtgtctcgtcaaatacggtattgtaacacaatgcttggctcctaccaagatc
aacgatcagtacctgactaatgtgcttctaaagataaatgcaaagcttggagggttgaat
tcgctgctgcaaattgaaagaaaccaagccattcctctcttgtcgaagactccaaccatt
atcttaggcatggatgtttcccatggctcaccgggacgggatgatgtaccgtctgtcgct
gcggttgttagttccctggagtggcctctcatatcaaaatataaagcctccgtatgcacc
cagtctcccaggctagaaatgatcgattccttgtttaagctagtggggaatgaggatcat
gttatcattagagatggggttagtgaaggccagtttaatcaggtgctgaacattgagcta
gcccagataatcaaggcatgcgagtttcttgccaatgagaaaaatgacagtgaatggtct
ccaaagttcacggtgatagttgcgcagaagaaccatcacaccaaattttttcagacagat
cgatcgaacaaagttgtcaatgttcctcctggtactgttgttgacaaaggaatctgtcat
cccaggaactgtgatttctacatgtgtgctcatgctgggatgattgggactacaaggccg
acgcattaccatgtgctgcatgatgagaacaatttcacccctgatgacttgcaggagctt
gtgcacaacctctcatacgtgtaccagaggagcacgacggccatctcaggtgtcgctccg
atctgctacgcgcacctggcggcggcgcaggtgtcgcagttcgtgagactcgacgacgcg
gcgtcggagggcagcggtgacggcggcgcgccgccgcggccggtgccggagctcccgcgc
ctgcacccggacggtggctgccttgagatggtgtatgagttggctcacctctacgacatc
atcatctctaagatacacattttatctatatttttattagcaagtttttcaaactactaa
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