Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0275600
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Entry
Os01g0275600 CDS
T02163
Name
(GenBank) Similar to Argonaute 4 protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os01g0275600
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os01g0275600
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Os01g0275600
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Os01g0275600
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
Os01g0275600
microRNA pathway
RISC loading complex
Os01g0275600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-ProteinID:
BAF04636
RAP-DB:
Os01g0275600
UniProt:
Q9SDG8
LinkDB
All DBs
Position
1
Genome browser
AA seq
904 aa
AA seq
DB search
MESNSGEIEELPPPPPLPPNAEPIKTDDTKKLSKPKRALMARSGCGKKGQPIQLLTNHFK
VSLKAADEFFHHYYVNLKYEDDRPVDGKGIGRKVLDKLQQTYASELANKDFAYDGEKSLF
TIGALPQVNNEFTVVLEDFNTGKSSANGGSPGNDSPGNDRKRVRRPYQTKTFKVELNFAA
KIPMSAIAQALRGQESENTQEAIRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGG
VMGCRGFHSSFRATQSGLSLNIDVSTTMIVKPGPVVDFLLANQKVDHPNKIDWAKAKRAL
KNLRIKTSPANTEYKIVGLSERNCYEQMFTLKQRNGDGEPEGVEVSVYEYFVKNRGIELR
YSGDFPCINVGKPKRPTYFPIELCSLVPLQRYTKALSTLQRSSLVEKSRQKPEERMSVLS
DVLKRSNYDSEPMLNSCGISIARGFTQVAGRVLQAPKLKAGNGEDLFARNGRWNFNNKRL
IKASSIEKWAVVNFSARCNIRDLVRDIIKCGGMKGIKVEDPFDVIEEDPSMRRAPAARRV
DGMIDKMQKKLPGQPKFLLCVLAERKNSDIYGPWKRKCLAEFGIITQCVAPTRVNDQYIT
NVLLKINAKLGGLNSLLQIETSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSR
EWPLVSKYRASVRSQSPKLEMIDGLFKPQGAQEDDGLIRELLVDFYTSTGKRKPDQVIIF
RDGVSESQFTQVLNIELDQIIEACKFLDENWSPKFTLIVAQKNHHTKFFVPGSQNNVPPG
TVVDNAVCHPRNNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRS
TTAISVVAPICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAGSAPVPELPRLHNKVRSS
MFFC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaacagtggtgaaatcgaggagttgccacctcccccacctttgccaccaaat
gctgagccaattaaaactgatgatacaaaaaagttatcaaaacctaagagggccttgatg
gctcgctctggttgtggcaaaaaagggcagccgatacagctgctgacgaaccacttcaag
gtttcactgaaggcagcagacgaatttttccatcactactatgttaatctgaagtatgag
gatgatagaccagtggatggaaagggcataggtagaaaggtgctggacaaactccagcag
acctatgcgtctgagctggcaaataaagattttgcatacgatggtgagaagagcctgttc
accattggtgctcttcctcaagtgaacaatgagttcacggtagttctggaagacttcaac
actggaaagtcatctgcaaatggtggcagccctggcaatgacagtccaggaaatgacagg
aaaagggttagaaggccatatcagacaaaaacttttaaagttgagctgaactttgcagca
aaaattcctatgagcgccattgctcaggccttgagaggccaggaatctgaaaacacccaa
gaagcaattcgtgttattgatatcatattaagacagcattccgcaaaacagggttgcctt
ttggttcgccaatcctttttccataacaatccttcaaattttgttgacttgggtggtggt
gtgatgggctgtaggggattccattcaagcttccgagctacacagagtggactttcactc
aatatcgatgtgtccacaacgatgattgtgaaacctggtcctgtggtagattttctactt
gccaaccagaaggttgatcacccaaacaaaattgactgggcaaaggccaagcgtgctctg
aagaatttaaggataaaaacaagtccagcaaatactgaatacaagattgttggtttgagt
gagagaaactgctatgaacaaatgttcactttgaagcaaagaaatggtgatggtgaacct
gaaggtgtggaagtatctgtttacgagtactttgtgaagaatcggggcatagagttgaga
tactctggtgattttccctgtatcaatgtggggaaaccaaaacggccaacttattttcca
attgagctctgctctcttgtgcctttgcaaaggtataccaaggctttgagtacactacag
aggtcttcgcttgttgagaagtccaggcagaaacctgaagaaaggatgtcagttttgtct
gatgtgctgaaacgcagcaactatgattcagagcctatgttgaattcttgtggtatttca
attgctcgaggttttacacaagttgctggcagggtgctgcaggcccccaagctaaaagct
ggaaatggtgaagatctttttgcacgtaatgggcggtggaactttaataataagaggctc
attaaggctagcagtatcgagaaatgggcagttgttaacttctctgcacggtgtaatatt
agggatcttgtccgagacatcatcaagtgtggtggcatgaaaggaattaaagtagaagat
ccatttgatgtcattgaggaggacccttcaatgcgacgagctcctgctgcaagaagggta
gatggcatgattgacaagatgcaaaaaaagcttcctggacaaccaaagtttctgctctgt
gttcttgctgagaggaagaattcagatatttatgggccctggaagcggaaatgtcttgct
gaatttgggattattacacaatgtgtggcccctactagggtcaatgatcagtatattaca
aatgtactgttaaagataaatgcaaagcttggtggcttgaactccctgcttcaaattgaa
acatccccttccattcctcttgtatccaaggtcccgacaataatattgggaatggatgtt
tcccatggatcacctggacagtctgatataccttcaattgctgcggtcgttagttctcgt
gaatggcctcttgtatcaaaatacagggcttcagtccgttctcagtcacctaagttagaa
atgattgatggactatttaagccacaaggagctcaggaagatgatggcctcattcgggag
ttattagttgacttctataccagtactggtaaacgtaagcctgatcaagtcattatcttc
agggatggggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaata
attgaggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgca
cagaagaatcatcataccaaattttttgtgcctggatctcaaaataacgttcctcctggt
actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac
gctggaatgattggaactacaaggcctacacattatcatatccttcatgatgagataggc
ttctctgctgacgatcttcaggagttggtccactccctttcctatgtctaccagaggagc
actacagccatatcagtcgttgcacccatttgctacgcgcatctcgctgctgctcaggtc
agccagttcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggccatacc
tcggcgggcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcaggagctcc
atgttcttctgctga
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