Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0383900
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Entry
Os01g0383900 CDS
T02163
Name
(GenBank) Peptidase S59, nucleoporin family protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Os01g0383900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os01g0383900
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os01g0383900
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Os01g0383900
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Os01g0383900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-ProteinID:
BAF05010
RAP-DB:
Os01g0383900
UniProt:
Q5VNZ9
LinkDB
All DBs
Position
1
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AA seq
617 aa
AA seq
DB search
MMSSSSSWSTPSFGLARESSSLLFTPGLVQHMGPNPSSSWSTPAHPVSDSPTFSFPTPFF
CEPAKGSRVYAYTKTADDLPHKHTLSISAMPAYISKSHEELRHEDYQRGDKGGDGLQKIM
VNSAPVPPMPMLSSVGAPVNMINSSQPAFSLKSKTNFSTPFSPAATADQQSAQLQFSTQN
HYYTSNPFWPAPIGLVRPCSSTGLQSSTPGLNCTGITSFPFLPTKQPSVGTQSSTLFPTT
FVHPSVELQKNASTHCASSQTAPCTTHGGILFGTAANTVSLTTSSTEPTTSSLGPTSCPA
TRHGDAPSTGFACQENVFSNSAAYTSTINADVPTNTIDLLLPNNIRLVRLRFSSTNDGNG
SVASEVHCHHDAKTSETPISLCIYPGENQELIIKSMVQPAKSHTGKQSSPTGGHPDDQSG
RSKVCNSAAGLPSSGPGENQKGNSSAGHKTPKSPLAAPRCEAIAESVLPRLYSADYYTVP
SIVELAVGERDEPGYCSHVKGFTVGRHGYGSVKFDGETDWRRLDIGSIVEFNEREIIVYR
DVSNTPPVGQELNKPAEVTLLNVKCVEQKNGLQFTEGPAVDRYKEILVQWTKDHGAEFVS
FDAAKGEWKFRVKNFNM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcttcttcgtcctggtctaccccaagctttgggttagccagggaatcctct
tcattgttgtttacacctggccttgtgcaacacatgggtcctaatccatcgtcatcttgg
tccacccctgctcatccagtctctgatagtcccacgttttctttccccacgccatttttc
tgtgagcctgcgaaaggcagcagggtctatgcttataccaagactgctgatgatcttcct
cataagcatacactatcaatttctgcaatgccagcatacataagcaaatcccatgaggag
cttcgacatgaagattatcagagaggagacaaaggcggtgatggcctgcagaaaattatg
gttaattcagctcctgtacctcccatgcccatgttatcatctgttggagctccagttaat
atgatcaattcaagtcaacctgctttcagtttgaagtccaaaacaaatttcagtactcca
ttttcaccagcagcaactgctgatcaacaatctgcacagctacagttctcaacacaaaat
cactattatacttccaacccattttggcctgccccaataggattggtgcgaccatgttca
tcaacaggactgcaatcttccacgccaggtctaaactgtaccggcatcacatcatttcca
ttcctgcccacaaagcaaccgtctgtgggaacccaatcatcaactttatttcctaccact
tttgtgcatccatccgtggagttgcaaaagaatgcctccacccactgtgctagctcacag
actgctccttgtacgacacacggaggaattctattcggcacggctgcaaatacagtctca
ttaactacatcatctactgagccaaccacatcatcccttggtccaacctcatgccctgct
actcgacatggagatgcaccttctactggatttgcatgtcaggaaaatgtattcagcaac
tcagcggcatatacatctactataaatgcggatgttcccacgaataccatagatttgcta
cttccaaataacatccggctggtaaggcttagattttcttcaacaaatgatggtaatgga
agtgttgcttcagaggttcattgtcatcatgatgctaaaacttcagaaacacccatttct
ttgtgcatatatcctggagagaaccaagagctgattatcaaatcaatggtgcagcctgct
aagagtcacactgggaaacaatctagtccaactggtggtcatccagatgatcaaagtggt
cgcagcaaagtatgcaacagtgctgctggtctgccatcgtcaggacctggtgagaatcag
aaggggaatagcagtgctggtcacaagacaccaaagtctccactggctgctcctcgttgc
gaagcgatagcggagtctgtactgcctcgcctgtacagcgccgattactacaccgtgcca
tctattgtggagctcgccgtgggagagagggacgagccaggctattgctcacatgtgaag
ggcttcacggtcggcaggcatggctatggcagcgtaaagtttgatggagaaactgattgg
agaaggcttgatattggatccatcgtggagttcaatgagcgtgagattattgtgtacaga
gatgtgagcaatacgccgcctgttgggcaggaactcaacaagcctgctgaagtcactctt
ctgaatgtcaagtgcgtcgaacagaagaatgggttgcagttcacagaggggccggcagtt
gataggtacaaggagattttggtgcagtggacaaaggaccatggcgcagaatttgtgtca
tttgacgcggccaagggagaatggaagttcagggttaagaatttcaatatgtag
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