Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0572300
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Entry
Os01g0572300 CDS
T02163
Name
(GenBank) Zinc finger, C2H2-type domain containing protein
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os01g0572300
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Os01g0572300
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-ProteinID:
BAF05296
RAP-DB:
Os01g0572300
UniProt:
Q0JLT2
LinkDB
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Position
1
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AA seq
449 aa
AA seq
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MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVRKKVYICPEASCVHHDP
SRALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKICGTREYKCDCGTIFSR
RDSFITHRAFCDALTEESAKAIGGIPAAMAAPGHHHHHHHHHHQLLFSPPPVMAHHQELA
ALQEQQQQQHHQDVMQSPHQHQQQQQQRQQLVQQNCGYAVKPEMAPWPTTMPYDHHHPLL
QPLCNANAAATAQSSATSAPPTTPQLPAAAAAAHLSATALLQKAAQMGATIGGAGTGAAG
AHYAHMASPAGAGAPAGGSATFGLGLSCLNTHQDGGGGGGNGLIPAGMMGHLARTASHGR
SGEDVAGAGGGGGDGMTRDFLGLRAFSHRDILLAGFDSSCMGHVNAAAGMAGYEPPPPHH
GQPQHQHQQQQQQQQGGSNEPWHGMGSHS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaacaggttcgtgtgcgagatctgcgggaaggggttccagagggaccagaac
ctgcagctgcaccggcgggggcacaacctgccgtggaagctgaagcagcgggggagcaag
gaggcggtgaggaagaaggtgtacatctgcccggaggccagctgcgtccaccacgacccc
tcccgcgccctcggcgacctcaccggcatcaagaagcacttcttccgcaagcacggcgag
aagaagtggaagtgcgacaagtgctccaagaagtacgccgtccactccgactggaaggcc
cactccaagatctgcggcacccgcgagtacaagtgcgattgcggcaccatcttctccagg
cgtgacagcttcatcacgcaccgggcgttctgcgacgcgctcaccgaggagagcgccaag
gccatcggcggcatccccgccgccatggccgcgccggggcaccaccaccaccaccaccac
caccaccaccagctgctcttctcgccgccgccggtcatggcgcaccaccaggagctcgcc
gcgctgcaggagcagcagcagcagcagcatcaccaggatgtcatgcagtcgccgcaccag
catcagcagcagcagcagcagcggcagcagctggtgcagcagaactgcgggtacgccgtg
aagccggagatggcgccgtggccgacgacgatgccctacgaccaccaccacccgctgctg
cagccgctctgcaacgccaacgccgccgccacggcgcagagctcggccacgtccgcgcca
ccgacgacgccgcagctgcccgccgccgccgccgccgcgcacctgtccgccacggcgctg
ctgcagaaggcggcgcagatgggcgcgaccatcggcggcgcgggcaccggcgccgcgggc
gcgcactacgcccacatggcgtccccggcgggcgcgggcgcgccggccggcggcagcgcc
accttcggcctcggcctgtcgtgcctcaacacccaccaggacggcggcggcggcggaggc
aacggcctcatcccggccgggatgatgggccacctcgcaagaaccgcctcccacggccgg
agcggcgaggacgtcgccggcgccggcggcggtggcggcgacggcatgacgagggacttc
ctcggcctccgcgccttctcccaccgcgacatcctcctcgccggcttcgactcgtcgtgc
atgggccacgtgaacgccgccgccggcatggccggctacgagccaccaccaccgcaccat
ggacagccacagcaccagcaccagcagcagcagcagcaacagcaaggcggcagcaacgag
ccatggcatggcatgggcagccatagctaa
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