KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0614500
Entry
Os01g0614500      CDS       T02163                                 
Name
(GenBank) RNA-binding region RNP-1 (RNA recognition motif) domain containing protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os01g0614500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os01g0614500
   03041 Spliceosome [BR:dosa03041]
    Os01g0614500
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     Os01g0614500
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     Os01g0614500
Spliceosome [BR:dosa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    Os01g0614500
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-ProteinID: BAF05481
RAP-DB: Os01g0614500
UniProt: Q0JL97 A0A0P0V565
LinkDB
Position
1
AA seq 447 aa
MDPYPKKRKPDENGAAVASSPAAGAAALGLTRDDLLRLVEPLSRDQLADIAATAALASGV
ALDAVRAAADRDPALRKLFVRGLGWETNSDSLRAIFSAFGDLEEAVVITDKSTGRSKGYG
FVTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGAAGGASGGAAGAGGAPAADVSLRKIF
VGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVK
VIDGHQLVCKLAIEGKKGKQSQQQQQQSGPGGAQPPQMLQGGPPDMPGSGLGLGGPQMGA
QYGGPGSLSSYGAFGGVGAGLGGPNPYANLPSSMGGGGAGLGSLGNQMPSGMGGAGAGAY
GPGGLGGGSFGGSSQFGAGGMGAYGGLGMGGASSLYRMQQGSGGLPSGGYGEGNYPLPGP
GFRGQEGGMSPGPGGRAPMYPNVPPYF
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggatccctaccccaagaagcgcaagcccgacgagaacggcgcggccgtggcctcctcc
ccggccgcgggcgccgccgcgctcggcctcacccgcgacgacctcctccgcctcgtcgag
ccgctctcccgggaccagctcgccgacatcgccgccaccgccgcgctcgcctcgggggtg
gccctcgacgccgtgcgcgccgccgccgaccgggacccggccctccgcaagctcttcgtg
cgggggctcggctgggagaccaactccgactcgctccgggccatcttctccgccttcggc
gacctcgaggaggccgtcgtcatcaccgacaagtccaccggccgctccaagggctacggg
ttcgtcacgttccgccacgccgactccgccgtcctcgccctcaaggagccctcgaagaag
atcgacggccgcatgaccgtcacgcagctcgccgccgccggcgcggccgggggggcgtcg
ggcggggccgccggcgccggtggcgcccccgcggccgacgtctccctccgcaagatcttc
gtcgggaacgtccccgccgacatgccgtcggagcgcctccttgcgcatttcgcagcctat
ggtgagattgaggaggggcctctagggttcgacaagcagacgggcaagttccggggcttt
gccctctttgtgtacaagacacccgagggtgcgcaggcctcgttagtggactcggtgaag
gtgattgacgggcaccagcttgtctgcaagctagcgatcgaagggaaaaaggggaagcaa
tcgcagcagcagcagcagcaatctggacctggtggggctcagccgccccaaatgctccaa
ggcgggccgccggacatgccgggttcagggcttgggcttggtggaccacaaatgggtgcg
cagtatggtggccctgggagtctgtcttcgtatggtgcatttgggggtgtaggcgctggg
ctaggtggtcccaatccgtatgcgaatttgccatcttccatgggcggcggcggagctggg
ttgggttcattgggcaatcagatgccttctgggatgggtggtgctggggctggtgcgtac
gggcctgggggattgggtggtggttcatttgggggctcatcccagtttggtgctggtggg
atgggggcttatgggggtctaggcatgggtggagcctcatcactgtaccgcatgcaacag
ggttcgggtgggcttccttctggcgggtatggtgagggtaactaccctcttccagggcct
ggtttccggggtcaggagggtggaatgtcacctggaccaggtggtagagctcctatgtac
cccaatgtgcctccttatttctga

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