Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0710000
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Entry
Os01g0710000 CDS
T02163
Name
(GenBank) Similar to WD-repeat protein RBAP1
KO
K10752
histone-binding protein RBBP4
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03082
ATP-dependent chromatin remodeling
dosa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Os01g0710000
03083 Polycomb repressive complex
Os01g0710000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os01g0710000
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
Os01g0710000
Histone modification proteins
HAT complexes
HATB complex
Os01g0710000
HDAC complexes
Sin3A-HDAC complex
Os01g0710000
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
Os01g0710000
PRC2.2
Os01g0710000
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
Os01g0710000
Heterochromatin formation proteins
Other heterochromatin formation proteins
Os01g0710000
Chromatin remodeling factors
NuRD complex
Os01g0710000
NuRF complex
Os01g0710000
NuRF complex (fruit fly)
Os01g0710000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-ProteinID:
BAF05950
RAP-DB:
Os01g0710000
UniProt:
A0A0P0V7E7
LinkDB
All DBs
Position
1
Genome browser
AA seq
453 aa
AA seq
DB search
MKEKGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLYLS
EQTDGTVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELP
QNSKIIATHTDSPDVLIWDVEAQPNRQAQLAQMESRPDLILRGHKDIAEFALAMCPAEPY
VLSGGKDKSVVWWSIQDHISALGDSSKTESSPGASGSKGKTANDKDSPKVDPRGIFLGHD
STVEDVQFCPSSAQEFCSVGDDSCLILWDARSGTGPAVKVEKAHGGDVHCVDWNLHDVNY
ILTGSADNSVRMWDRRNLGSGGAGIPVHKFEGHKAAVLCVQWSPDKASVFGSSAEDGFLN
VWDHEKVGNKKNPNAPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGGTLQ
IWRMSDLIYRPEDEVLAELENFKTHLASCAPRS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaaggggtcgagggcggcggtggacgagcgctacgcgcagtggaagtcgctc
atcccggtgctctacgactggttcgccaaccacaacctcgtctggccgtccctctcctgc
cggtggggaccccagtttgagaaggctacctacaagaatcgtcagcgtctttacctttca
gagcagacggatgggactgtccctaatactctggttattgcaaattgtgaagttgtcaaa
ccaagggttgcagctgctgaacatatatctcagttcaatgaggaagcacgatcacctttt
gtaaagaagtacaagactataattcatccaggcgaggtgaacaggattagggagcttccg
cagaacagtaagatcattgccactcataccgacagcccagatgttctcatttgggatgtc
gaggcccagccaaatagacaagctcaactggcacagatggagtctcgtcctgatttgata
ttaagaggacataaggatattgctgagtttgcgcttgctatgtgcccagctgagccatat
gtgttatctggaggaaaagacaaatctgttgtatggtggagcatccaagaccacatatct
gcactgggagattcctcgaaaactgaatcttctccaggggcatcaggaagcaagggaaaa
actgcaaatgataaggatagtcctaaagttgatcctcgtggtatctttcttggccacgac
agtactgttgaagatgtccagttctgcccttctagtgcacaggagttttgtagtgtaggc
gatgattcttgtcttattctttgggatgcccggagtggtacaggcccagctgttaaggtt
gagaaagctcatggtggtgatgttcattgtgttgactggaacctccatgatgttaactat
atcttaactggttctgcggataattctgtccgtatgtgggaccggagaaatctgggttct
ggaggagctggcattccagttcacaaatttgagggtcataaagctgctgttctttgtgtt
cagtggtcacctgacaaggcatctgtatttggaagctctgcggaagacggcttcttaaat
gtgtgggatcatgagaaggttggaaataagaaaaatcccaacgcacctgctgggcttttc
tttcaacatgctggtcatagggataagattgtagacttccactggaattcttcggatcct
tggactattgtgagtgtgtctgatgatggtgagagtactggtggaggtggaacattgcag
atatggcgcatgagtgacctgatataccgtccagaagatgaagttcttgcagagctggag
aacttcaagactcacttggccagctgtgctccaaggagctga
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