Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0772200
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Entry
Os01g0772200 CDS
T02163
Name
(GenBank) Transcription initiation factor IIF, beta subunit family protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Os01g0772200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os01g0772200
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
Os01g0772200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
Motif
Other DBs
NCBI-ProteinID:
BAH91313
RAP-DB:
Os01g0772200
UniProt:
A0A0P0V8U6
LinkDB
All DBs
Position
1
Genome browser
AA seq
138 aa
AA seq
DB search
MAEEAKNLETARADRSVWLMKCPTVVSRAWQEAATAAASSSSSSDAAAGANSNSNANPNP
VVAKVIVSLDPLRSEDQQLQFKMEMAQTGNGNTPKSYSLNMFKDFVPMCVFSESNQGKLS
CEGKVGHKFDMEPHSDEN
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcgaagaatctggagacggcccgggccgaccgctccgtgtggctcatg
aagtgcccgaccgtcgtctcccgcgcctggcaggaggccgccaccgccgccgcctcctcc
tcctcctcctcggacgccgccgctggcgccaactccaactccaacgcgaaccctaacccc
gtcgtcgccaaggtcatcgtctccctcgacccgctccgctccgaagatcagcagctccag
ttcaagatggagatggctcaaacaggcaatggcaatacaccaaagagttactccttgaac
atgttcaaggattttgtgccaatgtgtgtcttttctgaatccaaccaagggaagctttca
tgcgaagggaaagtcgggcacaaatttgacatggaaccgcacagcgatgaaaattga
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