Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0780400
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Entry
Os01g0780400 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dosa04812
]
Os01g0780400
Cytoskeleton proteins [BR:
dosa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
Os01g0780400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
eIF2A
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_LRRK2
RM44_endonuclase
WD_LRWD1
GNAT_acetyltr_2
Motif
Other DBs
NCBI-ProteinID:
BAF06350
RAP-DB:
Os01g0780400
UniProt:
A0A0P0V8W6
LinkDB
All DBs
Position
1
Genome browser
AA seq
838 aa
AA seq
DB search
MDPEKRGYRLQEFVAHDAEVRSLSIGKKSSRVFITGGSDRKVNLWAIGKQTPLLSLSGHT
GSVEAVEFDTAEVLVLAGSSNGSIKLWDLEEAKVVRSLTGHRSSCTSVEFHPFGEFFASG
SSDTDLKIWDIKKKGCIHTYKGHRGAIRTIRFTPDGRWVVTGGEDNIVKVWDLTAGKLLH
DFKFHSGQIRCIDFHPQEFLLATGSADRTVKFWDLETFELIGSAGPEATGVRSTVFHPDG
KTLFCGLDQSLKVFSWEPVRCHDVVDMGWSNLADLSIYEGKLLGCSYHECRVGVWVADIS
LIGPYALGVLPKANFFAELVHSLDDNPSKTIDTTAKSIPALATTHPKNLYKVKETGTAES
GIRGSNLTPASMDKTKRDKSGATPRRPDSSFKSSIQSSTPMRRMKAADSPYTNRKTVERN
FAQRDASLASRTGTANNSSTVKKGHLAESVSVKDIYTTPQTVSVPVVMPRDILEDKTAGS
ISGGIRGRAAVADDFHAPVHSRKLSVNSFVGDSVNSTKSMLTDPDVCSEGFSGLKFSFGL
TPYYKKEEYDNVDKVDSMDKGDNTQMTEKLDRTVSLEHQLQSNDTSEPPCSTTETTKVKY
VRGVAVPLGKTKSLVERWEKREATNVECSPPTGSCGDRAVRSDGPSSFSAEPSQAYEKDL
STIDEAMIPINLMQNHDEFINAVKSRLTKLEMMRHVFDQNGIKGAIAAVAKLPDNAVLAD
VVSTLKGKLDLFNLDIFLSFLPVLAGLLTSKAERHAIVSLELLLDLIKIFGPVIRSTLSA
HSAVGVDIQAEQRLQRCSRCFNHLQKIQQVLHPLIMRGGQSAQLAQELNLSLQDLVVI
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgagaagcgcggctacaggctccaggaatttgtcgcacatgatgctgaagtg
aggtccttgtctatcggcaagaagtcaagccgtgtgtttatcactggcggcagcgaccgc
aaggttaacctgtgggccattggcaaacagacaccacttctgagcttatcaggccacact
ggctcagttgaggctgttgagtttgatacagcagaggtgcttgtgcttgctggttcttca
aatggttccatcaagctctgggacttggaagaggctaaagttgtgcggtctcttactggg
cacagatcaagttgcacctctgttgaattccatccatttggcgagttttttgcatctggt
tcttcagatacagatcttaagatctgggatataaagaaaaaaggatgcattcacacatat
aagggtcacagaggagcaattagaacaatcagatttacacctgatggacgatgggttgtc
accggcggagaagataatattgtaaaagtgtgggacttgacagctggaaagcttctacat
gacttcaagttccatagtgggcaaatccggtgtattgattttcatccgcaagaatttttg
cttgcaacaggctcagctgatcgaacagttaagttttgggatcttgaaacttttgaattg
attggttctgctggacccgaggctactggtgttcgctctacggtctttcacccagatgga
aaaaccctattctgtgggttagaccaaagcctaaaggtattctcttgggagccagtaaga
tgtcatgacgttgttgacatgggatggagcaatttggctgaccttagtatttatgaagga
aaactcttgggatgctcctaccacgaatgccgagttggtgtttgggttgctgatatatcg
ctcattgggccctatgctcttggtgttttgcccaaagcaaatttctttgctgagctggta
cattctttagacgacaatccttcgaaaacgattgataccactgccaagtccattcctgct
ctagcaacgacacatccaaaaaatctgtacaaggtcaaggaaacagggactgctgaaagt
ggaattcgtggctcaaatttgactccagcaagtatggataaaaccaagagagataagagt
ggtgcaactcctcgaagacctgattcttctttcaaatcatctattcagagctctactcca
atgaggcgcatgaaagctgctgatagtccatacacaaatagaaaaacagtggagcgcaat
tttgcacagagggatgcctcgctagcatcccgtacgggaacagctaataattcttcaact
gttaaaaaaggccatcttgctgagtcagtatctgtaaaagatatttacactacaccacag
actgtttctgtgcctgtcgttatgcctagagacattttagaggacaaaacagcaggcagc
attagtggaggaatcagagggagagctgcagttgcagatgatttccatgctcctgttcat
tcaaggaaactttcagttaatagttttgtgggtgatagtgttaactcaacaaaatccatg
ctaactgatcctgatgtttgctctgagggtttctctggcttaaaattctcttttggacta
actccatattacaagaaagaagaatatgataatgtggataaagttgatagtatggataaa
ggtgataatacacaaatgacagaaaaattggacagaacagtgtcgttggagcatcaactt
cagtcaaatgatacctctgagccaccatgttctactacagaaacaaccaaggtcaaatat
gtcagaggagttgctgtgccattaggaaaaacaaagtctcttgttgagagatgggaaaag
agagaggctactaatgttgagtgctcaccaccaactggttcttgtggtgaccgtgcagtg
agatctgatggtccttcctccttttcagcagaaccaagtcaggcatatgagaaggacttg
tcaacaattgatgaggcgatgattccaatcaatttgatgcagaaccatgatgaatttata
aatgccgtaaaatctcggctgacaaagttagagatgatgcgtcatgtctttgaccaaaat
ggtatcaaaggagcgattgctgcagtggcaaagttgcctgacaatgctgttctagctgat
gttgttagtactctgaaggggaaacttgatctcttcaacctagacattttcttaagcttt
ctgcctgttcttgcggggttactgaccagcaaggctgaaaggcatgccattgtttctttg
gaattgttgttggatcttataaagatctttggaccagttattcgttcaacattgtcagct
cattcagcagttggagttgatattcaggctgagcagaggttgcaacgttgcagtcggtgt
tttaaccatttgcaaaagattcagcaagttctacacccgttgattatgcggggtggtcaa
tcagcacaacttgcccaagaactgaacctgtctttgcaagacttggtggtgatctga
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