Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0796700
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Entry
Os01g0796700 CDS
T02163
Name
(GenBank) Zinc finger, RING-type domain containing protein
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
Os01g0796700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os01g0796700
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os01g0796700
Enzymes [BR:
dosa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Os01g0796700
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Os01g0796700
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
Os01g0796700
Noncanonical PRC1 (PRC1.1)
Os01g0796700
Noncanonical PRC1 (PRC1.3/1.5)
Os01g0796700
Noncanonical PRC1 (PRC1.6)
Os01g0796700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_6
zf-UDP
zf-rbx1
TRAF3_RING
zf-RING_11
FoP_duplication
zf-C3HC4_5
zf-RING_10
ZNF512_C2HC
Motif
Other DBs
NCBI-ProteinID:
BAF06431
RAP-DB:
Os01g0796700
UniProt:
A0A0N7KDW6
LinkDB
All DBs
Position
1
Genome browser
AA seq
489 aa
AA seq
DB search
MPAQKRRLSSSPSSRPRDHVETNGMTGASKAAAGSGGGGGGGSGGGVPLPPRGGSAAAAA
AKRAADPQPQREGDSDAEFGGGVDGDSESSQSDGDMDEFIIVKLAEIRKEVQCPICLGII
RKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDID
KYEEEELAFSEEERSRNKKIQATIEETIRRQSEAVGKKRSTAKATATVFARKYRRNMRTR
GRGKTIAPDIAPTGSDNEDREEGNAIDTTKESSSADDRSSDLMPKRGRKRPASRASPART
IGSSDHVFEENDELIGGKESFTTSPLRGEMLAWGKNGTRSQTRHGSVGGSNGRMAKGGRV
AKLVDHLRTTDDMDKEFNLYLVLLPLDEQSMPNLDKPYISCRPTLSIRHLVQFIALQLSR
QVEELDIFMRIDHCNGSVTTQDCTTGVAKMRLSDGLERIREDKLLSELHPSFTSHHGDLE
LLYALKTQG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcagaagcgccggctctcgtcgtcgccgtcttcgaggccccgcgaccacgtg
gagactaacgggatgactggtgcttcgaaggccgccgccggcagcggcggcggaggagga
ggaggaagcggagggggagttccgctgccgccgaggggaggttccgccgccgccgccgcc
gccaagcgggcggctgacccgcagcctcagcgcgaaggcgattcggacgcggagttcggc
ggcggcgtggacggcgacagcgagtcgtcgcagagcgacggcgacatggacgagttcata
atagtgaaattagcagaaatacgaaaggaggtccaatgccctatctgtttagggattatc
cggaaaacaagaactgttatggagtgtttacatcggttttgcagggattgcatagataaa
tctatgcggctaggaaataatgaatgcccagcatgccgcactcactgtgcaagtagacgt
tctttgagggatgatcctaattatgatgcattgattgctgccctatatccagatattgat
aaatacgaagaagaggaacttgctttcagtgaagaggagaggagtcggaacaaaaagatc
caagcaacaattgaggaaacaattcgaagacagtcagaggcagttggtaaaaagcgttcc
acagccaaagcaactgccactgtttttgcaaggaagtacaggagaaatatgcgaacgcgt
ggtagaggtaaaaccattgctcctgatatcgcccctactggctcagacaacgaggataga
gaagaaggaaatgccattgataccaccaaggagtcatcttctgctgatgaccgctcttca
gatttaatgccaaaaagaggtaggaaaaggcccgcatcacgagcatctcctgctaggacc
attggcagcagtgaccatgtctttgaggagaacgatgagctgataggcggaaaagaaagt
ttcaccacgtctccattgcggggggagatgcttgcatggggcaaaaatggaacacgaagc
caaacaagacatggcagtgttggtggttcaaatggcagaatggcaaagggtggacgcgtt
gcaaagttggtggaccacctccgtactactgatgatatggataaggagttcaacttgtat
cttgttctccttcctcttgatgaacaaagtatgcctaacttggataagccctatataagt
tgtcgaccaaccttgtccattcggcatcttgtacagttcattgctctgcagttgtctcgg
caagttgaagaacttgatatctttatgaggatagaccactgcaatggaagtgttacaaca
caggactgcactacaggtgttgcaaaaatgcgtttatctgatggcctggaaagaataagg
gaggataaacttctttcagagcttcatccttcttttacttctcatcacggtgatctggaa
ttgctgtatgctttgaaaactcaaggctag
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