Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0846900
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Entry
Os01g0846900 CDS
T02163
Name
(GenBank) Transcription initiation factor TFIID domain containing protein
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Os01g0846900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os01g0846900
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os01g0846900
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Os01g0846900
Coactivators
SAGA/TFTC/STAGA complex
Os01g0846900
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
Os01g0846900
STAGA complex
Os01g0846900
TFTC complex
Os01g0846900
SAGA complex
Os01g0846900
SLIK complex
Os01g0846900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-ProteinID:
BAF06707
RAP-DB:
Os01g0846900
UniProt:
Q5N9M4
LinkDB
All DBs
Position
1
Genome browser
AA seq
542 aa
AA seq
DB search
MADPPSAAATASPQPDQLAAAAVSTPQNPNPNPLLSPQIPPSPTVSDLSAISSPQLDPSA
AGGGAMDYPPRPPQMQAPSPGQAAAGAGGFGQIHRSGSGSRLAAVGQLPQYAAAAARMYG
SQVNFSGGGGQVGQQQQQQQQLAARAAMLSQGQIGMLQGQGNAASAAHYGLQSQMMAQPR
QKGMVQGAQFNTANAAQALQGMQSMGVMGGMRGNGTIPYNQQRFAHAQAQLRPQQTSQQG
TLSPQVVGQGLTRTASIAALNPQLPGSSTNGPMAQMSLPQKQQQAAWLKQMQSSLGSPVS
PQQFQHQQRMLLIHQLQQQSGLNQHQIAQTQQQHPHLNTQLLQQQHILQQLQQQQQSPRI
SASGSQKSMNLTGSQPGTPLSGGTMTGGSASQGAEVTNQLLGKRKIQDLVSQVDPLGKVD
PEVEDLLLEIADDFIDSVTAFACTLAKHRKSSVLEAKDVLLHLEKNWHLSVPGFLREDKN
PQRHPVKVSVDPQQPECDAAGIRSTGNKLVINNSVANHQTRPPVTEPSPMPTMGPLSKVP
RF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgccgtccgcggccgccaccgcctcgccgcagcccgatcagctcgccgcc
gccgccgtctccaccccgcaaaaccccaaccctaaccccctcctctccccccaaatccca
ccgtcgcccaccgtctccgacctgtccgccatctcgtccccgcagctcgacccgtccgcg
gcgggcggcggggccatggactaccccccgcggccgccgcagatgcaggctccttcgccc
ggccaggcggcggccggggctggaggcttcggccagatccaccgctcgggctcgggctcc
cgcctcgccgctgtcggccagcttccacagtacgctgctgctgcggccaggatgtacggc
agtcaggtgaacttctcgggaggtggaggacaggtgggacaacagcagcagcagcagcag
cagctggctgctcgcgcggccatgcttagtcaaggccagattgggatgctgcaagggcag
gggaacgcagcatctgcggcgcactatggtctccagtcacagatgatggcgcagccaagg
cagaagggtatggtgcaaggtgcacaatttaatactgccaatgcagctcaagcattacaa
ggtatgcagtccatgggagtcatgggtggtatgagaggaaatggaactattccatataat
cagcaacgttttgcccatgcacaagcacaattgaggccgcagcagacatcacagcaaggc
acactgtctccacaggttgtgggtcaaggcttgacaagaacagcatcgattgctgcatta
aatccacagctacctggatcgtcgacaaatgggccgatggcacaaatgtcccttcctcag
aaacagcagcaggcagcatggttaaaacaaatgcaatcatcgctgggatcacctgtttct
ccacaacaatttcagcatcaacaaaggatgctattaatacatcaacttcaacagcagtca
ggattgaatcaacaccaaatcgcacaaacccaacaacagcatcctcatctcaatacccag
cttttacagcagcaacacattctacagcaacttcagcaacaacaacaatctccaaggata
tcagcatctggttcccagaagtccatgaacctgacaggatcacaaccgggcactccttta
tcaggtggaactatgactggtggaagtgcaagtcaaggagcagaagtaactaatcaactt
cttgggaagagaaaaatacaagatttggtttcacaggtagatcccctgggcaaggttgat
ccagaagtggaagatttgcttttggagattgctgatgacttcattgattcggtgactgca
tttgcgtgtacccttgcgaagcataggaaatcatcagtcctggaagccaaggatgtattg
ctgcacctagaaaaaaattggcacttatctgttcctggtttcttaagggaggacaagaat
ccgcaaagacatcctgtaaaggtatcagtggaccctcaacaaccagaatgtgatgctgct
ggtattagaagcacaggaaataaattggtaattaacaattcagttgccaaccatcaaaca
agacctccggttactgagccttcaccaatgcccacaatggggcctctgtcaaaagtgccc
cgtttctaa
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