Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0881500
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Entry
Os01g0881500 CDS
T02163
Name
(GenBank) Similar to Scarecrow-like 1 (Fragment)
KO
K27748
scarecrow-like transcription factor PAT
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os01g0881500
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Other transcription factors
GRAS
Os01g0881500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-ProteinID:
BAF06914
RAP-DB:
Os01g0881500
UniProt:
B7EDI2
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Position
1
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AA seq
553 aa
AA seq
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MSFIRRADPSTTYADNLYIHKFGTPNSNFAARRYASDTQLFRYGPEPYNPENSFYNQQAS
PMPYMVTADGHSPSSADNSCSDVAKDSPLVSNVSQQNSQSISDNQSSELEVEFDEDDIRM
KLQELEHALLDDSDDILYEISQAGSINDEWADPMKNVILPNSPKESESSISCAGSNNGEP
RTPKQLLFDCAMALSDYNVDEAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGK
GIYKALSCKEPPTLYQLSAMQILFEICPCFRFGFMAANYAILEACKGEDRVHIIDFDINQ
GSQYITLIQFLKNNANKPRHLRITGVDDPETVQRTVGGLKVIGQRLEKLAEDCGISFEFR
AVGANIGDVTPAMLDCCPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVT
LVEQDANTNTAPFQTRFREVYDYYAALFDSLDATLPRESPDRMNVERQCLAREIVNILAC
EGPDRVERYEVAGKWRARMTMAGFTPCPFSSNVISGIRSLLKSYCDRYKFEEDHGGLHFG
WGEKTLIVSSAWQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttatcaggcgagcagacccgtcaaccacttacgcagataatctttacatacat
aaatttggcactccaaattcaaatttcgctgcacgaagatatgcgtccgacacacagctg
ttccgttatgggcctgaaccatacaatcctgagaactccttttacaatcaacaggcctca
ccaatgccgtacatggtaacagctgatggccattctccatcttctgcagacaattcctgc
tcagatgtggcaaaagactcaccattggtgtccaatgtatctcagcagaattctcagtct
atatcagacaatcagagttctgaacttgaagtagagtttgatgaagatgatatcaggatg
aagcttcaggagctggagcatgctttacttgatgatagtgatgacatcttgtatgagatt
tcccaggcaggtagcattaacgatgaatgggctgatccaatgaagaatgtcatactccct
aactcaccaaaagaatcggaatcaagcatcagttgtgctggtagcaacaatggagaacca
cggaccccaaagcagttgctctttgactgtgcaatggcattatctgattataatgtagat
gaagcacaggcaatcataacggacctccggcagatggtctcaatccaaggggacccttct
cagaggattgcagcctatctagtggaaggtcttgcagcaagaatagtagcttcagggaaa
ggcatatacaaggccttgtcgtgcaaagagcccccgactctttatcagctttcggcaatg
caaatcctctttgaaatctgcccgtgcttccgatttggtttcatggctgctaattatgct
atacttgaagcctgcaaaggtgaagatagagtgcacattatagactttgacattaatcag
ggcagccagtacattacactgatacagtttctgaaaaataatgcaaataagccacgtcat
ttgagaataactggtgtggatgatcctgaaacggtacagaggaccgttggcggtttgaag
gtcattggtcaacgtctagagaaacttgcagaggactgtgggatatcttttgagttcagg
gcagttggtgctaacattggggatgttacacctgcaatgctagattgttgtcctggggaa
gcactagttgtcaattttgcattccagctgcaccaccttcctgacgagagcgtttcaatt
atgaatgaaagggaccaactccttcgaatggtgaagggtctgcaaccaaagctcgtcaca
ctggttgagcaggatgccaataccaatactgctccatttcagacaaggttccgtgaggtt
tatgattattatgctgcactttttgattcactggacgcgacacttccaagggaaagtccg
gatagaatgaatgtggagcggcaatgtcttgctcgtgaaattgtcaacatcttggcttgc
gaaggtcctgatcgtgtggagagatatgaagttgctggaaaatggagggcaagaatgaca
atggctggcttcacaccatgcccatttagtagcaatgtcatcagcgggataagatcgtta
ctgaagtcgtactgtgacagatacaagttcgaggaggaccatgggggacttcacttcggc
tggggagagaaaactctaatcgtctcctccgcatggcaatag
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