Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0934000
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Entry
Os01g0934000 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K22991
WD repeat-containing protein 45
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os01g0934000
Membrane trafficking [BR:
dosa04131
]
Autophagy
Other autophagy associated proteins
Others
Os01g0934000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
CPSF_A
Beta-prop_HPS5
BCAS3_WD40
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
DUF7099
PEP5_VPS11_N
Ge1_WD40
Beta-prop_IFT80_2nd
NBCH_WD40
Motif
Other DBs
NCBI-ProteinID:
BAF07221
RAP-DB:
Os01g0934000
UniProt:
Q0JGA7
LinkDB
All DBs
Position
1
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AA seq
457 aa
AA seq
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MATPPHDASPAPPNPNPVSDDPPPPPPVTETKPEPEPPLPTTSIDPTPSGDEESGDDSSS
SVSSASSTSPTAAAAAAAAGGGGGGGGERAAPHPAAKDLLHISFNQDYGCFAAGTKSGFR
IYNCDPFREIFRRDLGAAGDNGVGGGGGGIGVVEMLFRCNILALVGGGDAPHYPPNKVMI
WDDHQSRCIGELSFRSPVRGVRLRRDRIIVVLENKIFVYNFADLKLVHQIETAPNPKGLC
AVSQQPGSIVLVCPGAQKGQVRVEHYGARKTKFINAHTSRVACFALSQDGRLIATASTKG
TLVRIYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGLTT
NDKPLPAPDPDVPHISPSLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAV
VGMDGSFYRCQFDPVNGGEMLQLECYNFLKPSSDQPQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgccgcacgacgcctcgccggccccaccaaaccctaaccccgtctccgac
gaccccccgccgccgccgccggtgacggagacgaagccggagccggagccgcctctcccc
accacctcgatcgaccccaccccgtctggcgacgaggagagcggcgatgactcctcgtct
tctgtctcatccgcctcgtctacttcgcccacggccgccgcggctgctgctgctgcggga
ggtggaggtggaggtggaggcgagagggcggctccccacccggcggcgaaggatctcctc
catatctccttcaaccaggactacggctgcttcgcggcggggaccaagtcgggcttccgc
atctacaactgcgatccattccgcgagatcttccgccgggacctcggggccgcgggggac
aacggcgtcggcggtggaggaggaggaatcggcgtcgtggagatgctgttccggtgtaac
atactggccctcgtcggcggcggagacgcccctcactacccgcctaacaaggtgatgatc
tgggacgaccaccagagccggtgtatcggggagctctccttccgctcccccgtgcgcggt
gtccgcctccgccgcgatcgcatcatcgtggtgctagagaacaaaatcttcgtctacaat
ttcgcggacctgaagcttgttcaccagatcgagacggcgcctaacccgaagggcctctgc
gcggtttcgcagcagcccggatcgattgtgctggtttgccctggtgcacagaaagggcag
gttagagtggagcactatggtgccaggaagaccaaattcatcaatgcgcatacttcccgt
gtcgcgtgctttgcattatcacaggatgggaggctcattgctactgccagcaccaagggg
acacttgttagaatctacaatgctgccgagggcaatctcctgcaggaagtacggagaggt
gctgatagagcagaaatatatagcttggcgttctccaacaatttgcaatatttggctgta
tcaagtgataaaggaacaatacatgtgttcaatctaaagataaatgttggattaaccacg
aatgataagcccctgcctgctccagatcctgatgttccacatatcagtccatctctttct
ttcattaagggtgtactaccaaaatatttccactcggagtggtctgtagctcagttcaga
ctccacgagggggagcaatatattgttgcatttggccatgagaagaataccgtggcagtt
gttggcatggatggaagcttctaccgatgccagttcgaccctgtaaacggaggagagatg
ctgcagctggagtgctacaatttcctaaaaccatcatcggatcaaccacagtag
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