Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0948100
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Entry
Os01g0948100 CDS
T02163
Name
(GenBank) ERCC4 domain containing protein
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03440
Homologous recombination
dosa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Os01g0948100
03460 Fanconi anemia pathway
Os01g0948100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os01g0948100
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
Os01g0948100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
DUF6429
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BAF07304
RAP-DB:
Os01g0948100
UniProt:
Q8GT06
LinkDB
All DBs
Position
1
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AA seq
660 aa
AA seq
DB search
MAPEARQLKVHLRENEAVAQCVLEKWRSMEEKPGGLKENLAHTLYKSYRNVCAAKEPIRS
LKDLYQIKGVGKWVIRQLKGSFPESSPDLSPPESNAAGEKGKKAGGSKRYVPQKNSAAYA
ILITLHRETINGKSHMKKQELIDATEASGLSRSAIGPDKSKAKPGAFASSQKDWYTGWSC
MKTLTSKGLVAKSGNPAKYMITEEGKSTALECLSRSGLDDHAAPLVINSAPDTSNASHKL
NNICMTSFVETSSGPSRAIGRPKTSIANPATKTSPEVTYLTSQESLNYNSDVRTAENCAE
EIILSDSDSEELYTENYPLIGSEEFTERVAPPILNASNSGKTTTNYRFSDCSASISPRSS
EGTFEMQSSSTMGIAEFNMLDNDTVCMDNSILAMPPRRSSKNFLEDYEVVLILDDRENFG
GRSRKTVDNIHSQFRVPVEIKHLPVGDGIWIARDRKLHTEYVLDFIVERKNVADLCSSIT
DNRYKDQKLRLKKCGLRKLIYLVEGDPNPLDTSERIKTACFTTEILEGFDVQRTPGYAET
VRTYGNLTHSITEYYSTHFSTGANTSQVCLTYDEFTKKCDDLKKITVSDVFALQLMQVPQ
VTEEAALAVIGLYPTLFSLAKAYSMLDGDTHAQEKMLKNKSTLINAGASRNIFKLVWAEG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggaggcgaggcaactcaaggtgcacctccgggagaacgaggcggtcgcgcaa
tgcgtcctggagaagtggcgctcgatggaggagaagccgggcggcctcaaggagaacctg
gctcacacgctctacaaatcctaccgcaacgtctgcgccgccaaggagcccatccgatcc
ctcaaggacctgtatcagatcaagggcgttgggaaatgggtcataaggcaactgaaagga
tcctttccagagtctagtccagatttatctcccccggaaagtaatgcagcaggagaaaag
gggaagaaagcaggagggtcaaagcgttatgtgccacagaagaattctgctgcttacgcg
atactgatcacgctccatagggaaacaatcaatgggaagagtcatatgaagaagcaagag
cttattgacgccactgaagcaagtggcctgtcacgaagtgcaattggtccagacaaaagt
aaagcaaaaccaggggcttttgcaagttctcagaaggactggtacactggatggagctgc
atgaaaacattgacatctaaaggactggttgcaaagtccggtaaccctgcaaagtatatg
ataactgaagaagggaaatcgactgctcttgaatgtctctcaaggtctgggttagatgat
catgcagcacctttggtgataaacagtgctcccgacacatctaatgcaagtcataagttg
aataatatttgcatgacttcttttgttgagacatcatccggaccttctagggcaattggt
agacccaaaacatctattgccaaccctgccactaagacatcaccagaagtgacatatttg
acaagtcaagaatcactcaattacaactctgatgttagaactgctgagaactgtgctgaa
gaaatcattcttagtgactcagattctgaagaattatatacagagaactatcctctaata
ggttctgaagaatttactgagagggttgcccctccaatattgaatgcaagcaactctggc
aagactactacaaattacagattctcagactgttcagcttctatttctcctcgttcgtct
gaaggaacatttgagatgcagtcttctagtacaatgggtattgctgaattcaatatgctg
gacaatgatactgtatgtatggacaattctatactagccatgccacctcggcgatccagt
aaaaattttcttgaagattatgaagttgtgttgatattggatgatcgtgaaaattttggg
ggtcgttcaagaaaaactgttgataacatacattcacaatttcgtgtacctgtagagata
aagcatttgcctgttggggatggtatttggattgctcgtgatagaaagcttcacacagag
tatgttcttgatttcattgttgaaaggaagaatgttgcagatttgtgtagttcaatcaca
gacaaccgatacaaagatcagaagttaaggctcaagaaatgtggcctaaggaagctgata
tatctggttgaaggtgatccaaaccctcttgatacatcagaaaggatcaaaactgcctgc
ttcaccactgaaattcttgaaggatttgatgtccagagaacccctgggtatgctgagact
gtaaggacatatggcaaccttactcattcaataaccgaatactacagcacacacttttct
actggtgctaatacttctcaagtttgcctgacctatgatgagtttacgaagaagtgtgat
gaccttaagaagataactgtgagtgatgtattcgcccttcaacttatgcaggtgccacaa
gtgacagaagaagctgcacttgctgtgatagggctctatccaactcttttctcacttgct
aaggcgtactctatgcttgatggtgatacccatgcccaagagaagatgttgaagaacaag
agcacgctgataaatgcaggggctagcagaaacatattcaagcttgtctgggctgaagga
taa
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