Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0958900
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Entry
Os01g0958900 CDS
T02163
Name
(GenBank) Similar to MLH1 protein (Fragment)
KO
K08734
DNA mismatch repair protein MLH1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03430
Mismatch repair
dosa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Os01g0958900
03460 Fanconi anemia pathway
Os01g0958900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os01g0958900
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
Os01g0958900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BAF07371
RAP-DB:
Os01g0958900
UniProt:
A0A0P0VD29
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Position
1
Genome browser
AA seq
724 aa
AA seq
DB search
MDEPSPRGGGCAGEPPRIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVA
VKDGGLKLIQVSDDGHGIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYV
GHVTVTTITEGQLHGYRVSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSN
DDYPKIVDFISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGASVVRDLIE
IKVSYEDAADSIFKMDGYISNANYVAKKITMILFINDRLVDCTALKRAIEFVYSATLPQA
SKPFIYMSIHLPSEHVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQA
LNLSGIAQANPQKDKVSEASMGSGTKSQKIPVSQMVRTDPRNPSGRLHTYWHGQSSNLEK
KFDLVSVRNVVRSRRNQKDAGDLSSRHELLVEIDSSFHPGLLDIVKNCTYVGLADEAFAL
IQHNTRLYLVNVVNISKELMYQQALCRFGNFNAIQLSEPAPLQELLVMALKDDELMSDEK
DDEKLEIAEVNTEILKENAEMINEYFSIHIDQDGKLTRLPVVLDQYTPDMDRLPEFVLAL
GNDVTWDDEKECFRTVASAVGNFYALHPPILPNPSGNGIHLYKKNRDSMADEHAENDLIS
DENDVDQELLAEAEAAWAQREWTIQHVLFPSMRLFLKPPKSMATDGTFVQVASLEKLYKI
FERC
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccttcgccgcgcggaggtgggtgcgccggggagccgccccgcatccggagg
ttggaggagtcggtggtgaaccgcatcgcggcgggggaggtgatccagcggccgtcgtcg
gcggtgaaggagctcatcgagaacagcctcgacgctggcgcctccagcgtctccgttgcg
gtgaaggacggtggcctcaagctcatccaggtctccgatgacggccatggcatcaggttt
gaggatttggcaatattgtgcgaaaggcatactacctcaaagttatctgcatacgaggat
ctgcagaccataaaatcgatggggttcagaggggaggctttggctagtatgacttatgtt
ggccatgttaccgtgacaacgataacagaaggccaattgcacggctacagggtttcttac
agagatggtgtaatggagaatgagcctaagccttgcgctgcggtgaaaggaactcaagtc
atggttgaaaatctattttacaacatggtagcccgcaagaaaacattgcagaactccaat
gatgactaccccaagatcgtagacttcatcagtcggtttgcagtccatcacatcaacgtt
accttctcttgcagaaagcatggagccaatagagcagatgttcatagtgcaagtacatcc
tcaaggttagatgctatcaggagtgtctatggggcttctgtcgttcgtgatctcatagaa
ataaaggtttcatatgaggatgctgcagattcaatcttcaagatggatggttacatctca
aatgcaaattatgtggcaaagaagattacaatgattcttttcataaatgataggcttgta
gactgtactgctttgaaaagagctattgaatttgtgtactctgcaacattgcctcaagca
tccaaacctttcatatacatgtccatacatcttccatcagaacacgtggatgttaatata
cacccaaccaagaaagaggttagccttttgaatcaagagcgtattattgaaacaataaga
aatgctattgaggaaaaactgatgaattctaatacaaccaggatattccaaactcaggca
ttaaacttatcagggattgctcaagctaacccacaaaaggataaggtttctgaggccagt
atgggttctggaacaaaatctcaaaaaattcctgtgagccaaatggtcagaacagatcca
cgcaatccatctggaagattgcacacctactggcacgggcaatcttcaaatcttgaaaag
aaatttgatcttgtatctgtaagaaatgttgtaagatcaaggagaaaccaaaaagatgct
ggtgatttgtcaagccgtcatgagctccttgtggaaatagattctagcttccatcctggc
cttttggacattgtcaagaactgcacatatgttggacttgccgatgaagcctttgctttg
atacaacacaatacccgcttataccttgtaaatgtggtaaatattagtaaagaacttatg
taccagcaagctttgtgccgttttgggaacttcaatgctattcagctcagtgaaccagct
ccacttcaggagttgctggtgatggcactgaaagacgatgaattgatgagtgatgaaaag
gatgatgagaaactggagattgcagaagtaaacactgagatactaaaagaaaatgctgag
atgattaatgagtacttttctattcacattgatcaagatggcaaattgacaagacttcct
gttgtactggaccagtacacccctgatatggaccgtcttccagaatttgtgttggcttta
ggaaatgatgttacttgggatgacgagaaagagtgcttcagaacagtagcttctgctgta
ggaaacttctatgcacttcatcccccaatccttccaaatccatctgggaatggcattcat
ttatacaagaaaaatagagattcaatggctgatgaacatgctgagaatgatctaatatca
gatgaaaatgacgttgatcaagaacttcttgcggaagcagaagcagcatgggcccaacgt
gagtggaccattcagcatgtcttgtttccatccatgcgacttttcctcaagcccccgaag
tcaatggcaacagatggaacgtttgtgcaggttgcttccttggagaaactctacaagatt
tttgaaaggtgttag
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