Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0960500
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Entry
Os01g0960500 CDS
T02163
Name
(GenBank) Copine domain containing protein
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os01g0960500
Enzymes [BR:
dosa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Os01g0960500
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Os01g0960500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
Sina_RING
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Prok-RING_4
TerY_C
Motif
Other DBs
NCBI-ProteinID:
BAF07381
RAP-DB:
Os01g0960500
UniProt:
Q5JN37
LinkDB
All DBs
Position
1
Genome browser
AA seq
387 aa
AA seq
DB search
MWGDRTHHKHWNQAHVPSGTSKDKFQAKGQPKFIPDNYSSVDEVTAALRDAGLESSNLIL
GIDFTKSNEWSGRYSFGRKSLHAISATPNPYEQAISIIGRTLSPFDDDNLIPCFGFGDAS
THDQSVFSFYQDSRSCCGFEEVLERYRQIVPHLNLSGPTSFAPLIYAAISVVENSNLQYH
VLVIIADGQVTTSNTKDGKLSPQEQATIQAIVDASYYPLSIVMVGVGDGPWDAMQHFDDC
IPDRAFDNFQFVNFTEIMSTSKDMPKKEAAFALAALMEIPSQYKATQGLRPLEKHAGHVA
SHLRILPPPNKVLENDNAAASRPPTASSQSTGFGKNTTDEQVCPICLTNPKDMAFQCGHL
TCKECGPTLSTCPLCRVPITMRVRLYS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcgatcggactcatcacaagcactggaatcaagctcatgttccctctggaact
tctaaggacaaattccaggccaaagggcaaccgaagtttattcctgacaattacagttca
gtggatgaggttactgctgcgttgagagacgctggtcttgagtcatcaaatctgattctt
ggtattgacttcaccaaaagcaatgaatggtcaggcagatattcctttggaagaaaatct
ctgcatgccattagtgccacccctaatccatatgagcaagcaatttctataattgggcga
acactgtctccttttgatgatgacaacttgataccatgttttggatttggtgatgcttct
acgcatgatcagtccgtcttcagcttctaccaagacagtcgttcttgctgtggttttgaa
gaggttcttgaaagatataggcaaattgtcccacatttgaacctttcaggaccgacttct
tttgctcctcttatctacgcagcaatttctgttgtcgaaaatagtaacttgcaataccat
gtcctcgtcatcatagctgatggacaggtgaccacctcaaatacaaaggatggaaaatta
agtccgcaagagcaagcaactatacaagcaattgttgatgcaagctactatcctctttca
attgtgatggttggggtgggagatgggccatgggatgcgatgcaacacttcgatgactgt
attcctgacagagcttttgacaattttcagtttgtgaacttcacagagattatgtcaaca
agtaaggatatgccaaagaaagaggctgcatttgcccttgcagcccttatggaaatacct
tctcaatataaagcaactcaaggcctccgaccactggagaagcatgcgggtcatgtggcc
agtcatctgaggattcttcctcctccaaacaaagttcttgagaacgacaacgctgcagcc
tcacgtcctccaactgcaagctcccagtcaactggcttcggaaagaataccactgatgag
caggtttgcccaatctgcttaaccaatccaaaggacatggcttttcaatgcggtcacctg
acatgcaaggaatgtggcccaactctatcaacatgccccttatgccgcgtgccaattacg
atgcgtgtaaggctctactcgtga
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