Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0870300-01
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Entry
Os01t0870300-01 CDS
T02163
Symbol
Os01g0870300, AMT3;1, AMMONIUM_TRANSPORTER_3_MEMBER_1
Name
(RAP-DB) Hypothetical conserved gene.
KO
K10879
DNA-repair protein XRCC2
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Os01t0870300-01 (Os01g0870300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os01t0870300-01 (Os01g0870300)
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
Os01t0870300-01 (Os01g0870300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
AAA_25
Motif
Other DBs
RAP-DB:
Os01t0870300-01
Oryzabase:
3066
LinkDB
All DBs
Position
chr01:join(37727498..37727695,37728241..37728388,37728681..37728820,37729705..37729778,37730802..37730934)
AA seq
230 aa
AA seq
DB search
MAGEAGGDPRAWLAVDETAAAFLSRSLSARPPILLPPPLHRAPLRPGNVVEIAGPSNSGK
SQLLLTAAVQCILPKEWKGTYFGGLGKVVMYLDLDCRFDVLRLAQILRNRIGECCGSTNP
TNEEFAKDGATNSFSENTLFSECMKRFLYARCYNSSDFIAALQNIHSQSPAKSEVLGVGI
YFLMIDRQENSITAEYDRNSCPKITQFFATSTCFGDGHQGTHIWRRIHWK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagaggcagggggagacccccgagcgtggcttgccgtcgacgagacggcggcg
gccttcctctcccgctccctctcggcgcggccccccatcctcctcccgccgccgctccac
cgcgctccgctccgcccgggcaacgtcgtcgagatcgctggcccgtccaactccggcaag
tcccagctgcttctcacggctgcagtacaatgcatattaccgaaggagtggaagggtacc
tattttgggggcctgggtaaagtggtcatgtacttggatctggactgccgatttgatgtg
ctgcggctggctcaaattctgagaaatcgcattggagagtgctgtggctccacaaatcca
acaaatgaagaatttgcaaaggatggcgctacaaatagtttttccgaaaacacgctattt
tctgagtgcatgaagcgtttcttgtatgcccgttgttacaatagttcagattttatagca
gctttgcagaatatacattcccaatcaccagcaaagagcgaagttcttggtgttggcata
tatttccttatgatagacaggcaggagaactctatcactgcagagtatgacagaaacagt
tgtccaaaaattacgcaattttttgcaacttcaacctgttttggtgatggccaccaaggc
acccatatatggcgaaggattcactggaaatga
DBGET
integrated database retrieval system
